Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 SEPT7P8-201ENST00000413308 775 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 OR6C64P-201ENST00000419708 825 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 LINC00993-201ENST00000420453 540 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 CYCSP11-201ENST00000436426 315 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AL138787.1-202ENST00000437804 898 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 CEACAMP9-201ENST00000442990 513 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC093166.2-201ENST00000455969 1017 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC021660.1-201ENST00000465006 554 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RN7SL738P-201ENST00000470264 297 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC091544.1-201ENST00000484702 348 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC104971.1-201ENST00000495117 578 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RN7SL558P-201ENST00000497468 299 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC002456.2-201ENST00000509356 380 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC133555.2-201ENST00000550213 292 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 SNORA74C-1-201ENST00000580726 201 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 MIR4472-2-201ENST00000582069 67 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RN7SL690P-201ENST00000582087 240 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 MIR6853-201ENST00000619642 74 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 BX005214.3-202ENST00000619809 325 ntBASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CLCF1Q9UBD9 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC009643.2-201ENST00000603543 1448 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC004817.4-201ENST00000602396 3625 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 SOCS5P3-201ENST00000425115 1576 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RNA5SP505-201ENST00000364748 108 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RPS16P5-201ENST00000406501 404 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC119751.6-201ENST00000416712 186 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL807761.1-201ENST00000417622 171 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC013429.2-201ENST00000418798 781 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC092570.3-201ENST00000420113 693 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 PTP4A1P1-201ENST00000420539 515 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL645608.4-201ENST00000423619 154 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC092162.1-201ENST00000432828 434 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RPS17P8-201ENST00000434525 335 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC098583.1-201ENST00000480875 255 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RN7SL205P-201ENST00000490174 284 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC069304.1-201ENST00000491593 704 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AP002981.1-201ENST00000517692 975 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC105031.1-201ENST00000518550 476 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 RPL23AP53-201ENST00000521854 457 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AP001804.2-201ENST00000533932 910 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AL110118.1-201ENST00000553543 400 ntBASIC4.29□□□□□ -1.72
CLCF1Q9UBD9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms