Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 AC133552.1-201ENST00000569988 4007 ntBASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 AC099786.3-201ENST00000565735 1410 ntBASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DNMT3BQ9UBC3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 RN7SKP126-201ENST00000411143 300 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC010385.1-201ENST00000412374 256 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC211486.3-201ENST00000412694 621 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC023128.2-201ENST00000420880 1223 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 YWHAZP2-201ENST00000440317 728 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC092473.1-201ENST00000441098 221 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC097499.1-201ENST00000444277 208 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 HSPE1P22-201ENST00000456856 327 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC109464.1-201ENST00000511091 819 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC079064.1-201ENST00000528365 362 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 DUXAP5-201ENST00000529668 529 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC023538.1-201ENST00000534576 736 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC011840.5-201ENST00000582125 771 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC113368.1-201ENST00000603736 382 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC097065.2-201ENST00000608159 533 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC079395.3-201ENST00000615161 484 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 OR8G7P-201ENST00000616658 848 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC104985.3-201ENST00000623479 597 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 AC024023.1-201ENST00000624530 922 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 MFSD8-220ENST00000641243 1422 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 DNM1P47-203ENST00000571780 12667 ntBASIC5.63□□□□□ -1.51
DNMT3BQ9UBC3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AL078621.3-201ENST00000623707 2042 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RN7SKP115-201ENST00000363177 317 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RN7SKP103-201ENST00000363848 320 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 RPL12P28-201ENST00000430852 489 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AC092647.3-201ENST00000443044 633 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 Z80107.2-201ENST00000445127 392 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 MTND4LP2-201ENST00000502312 285 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AC112673.1-201ENST00000513168 575 ntBASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.62□□□□□ -1.51
DNMT3BQ9UBC3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms