Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 AL390774.1-201ENST00000411924 246 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC009518.2-201ENST00000418056 731 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AL133325.1-201ENST00000421090 382 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 NANOGP4-201ENST00000427230 913 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 CACYBPP1-201ENST00000438592 684 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 PTMAP6-201ENST00000439110 327 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 ART2BP-201ENST00000453501 499 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 PSAT1P4-201ENST00000466500 526 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC079841.1-201ENST00000481228 950 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC093890.1-201ENST00000502554 540 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 MTCO3P28-201ENST00000513351 515 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC083923.1-201ENST00000523708 376 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AP001804.1-201ENST00000526868 919 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC126177.5-201ENST00000549599 178 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AP001269.3-201ENST00000588718 329 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC125494.2-201ENST00000602431 657 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 VN1R74P-201ENST00000613259 503 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 STMN1P1-201ENST00000617809 440 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 MIR6730-201ENST00000622213 67 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC007342.8-201ENST00000623278 678 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC079776.5-201ENST00000641920 211 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 MRRFP1-201ENST00000435941 1675 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 CDC27P2-201ENST00000425026 1922 ntBASIC5.77□□□□□ -1.49
TDP1Q9NUW8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.77□□□□□ -1.49
TDP1Q9NUW8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 SFR1P1-201ENST00000403720 688 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC027644.1-201ENST00000419595 298 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC007394.1-201ENST00000421941 531 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 GAPDHP58-201ENST00000438477 1006 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 ARL5AP2-201ENST00000444698 533 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 EEF1B2P5-201ENST00000444820 548 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 EXTL2P1-201ENST00000446218 416 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC233982.1-201ENST00000451247 436 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC005532.2-201ENST00000467154 373 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC138938.1-201ENST00000515431 782 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 snoZ278.1-201ENST00000517059 112 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 BLZF2P-201ENST00000553776 1130 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 MTCO1P40-201ENST00000574371 625 ntBASIC5.76□□□□□ -1.49
TDP1Q9NUW8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.76□□□□□ -1.49
TDP1Q9NUW8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms