Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 OR56B2P-201ENST00000317102 954 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 RN7SKP74-201ENST00000362849 309 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AL645927.1-201ENST00000396783 406 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 RN7SKP125-201ENST00000410481 302 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 RNA5SP113-201ENST00000410486 84 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 RN7SKP278-201ENST00000410504 342 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 COX6B1P1-201ENST00000415962 213 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC096644.3-201ENST00000416788 338 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC074367.1-201ENST00000438685 1125 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 PTMAP6-201ENST00000439110 327 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 MTND5P8-201ENST00000449817 1083 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AK4P6-201ENST00000505168 528 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AP001880.2-201ENST00000538233 448 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 CR383656.14-201ENST00000551951 406 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 MAPK10-304ENST00000641341 3984 ntBASIC5.05□□□□□ -1.6
SIX2Q9NPC8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.05□□□□□ -1.6
SIX2Q9NPC8 AL138820.1-201ENST00000617901 5305 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL512283.1-201ENST00000606756 1384 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL929601.4-201ENST00000613011 1341 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 RNA5SP151-201ENST00000365632 117 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 RPL21P43-201ENST00000425440 472 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 NRBF2P3-201ENST00000432731 865 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 MRPS33P4-201ENST00000434892 317 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC063943.1-201ENST00000465434 453 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 OR9N1P-201ENST00000491296 333 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC025164.1-201ENST00000496249 478 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 MTND3P24-201ENST00000506306 329 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 OR5M14P-201ENST00000506803 618 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 BTG4P1-201ENST00000510421 183 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 RNA5SP446-201ENST00000515955 82 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 OR7E10P-201ENST00000526420 991 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC010547.7-201ENST00000570323 333 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC098483.2-201ENST00000603158 454 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC105148.1-201ENST00000604961 409 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC011815.3-201ENST00000624194 473 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC107068.1-201ENST00000563286 4218 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 CUL4AP1-201ENST00000514750 1863 ntBASIC5.04□□□□□ -1.6
SIX2Q9NPC8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.04□□□□□ -1.6
SIX2Q9NPC8 AC139426.3-201ENST00000605648 2059 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 RN7SKP149-201ENST00000363008 344 ntBASIC5.03□□□□□ -1.6
SIX2Q9NPC8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SIX2Q9NPC8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms