Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 GAPDHP15-201ENST00000398586 975 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LRRC37BP1-201ENST00000398851 714 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 MIR1178-201ENST00000408396 91 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 U3.36-201ENST00000408418 213 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 SNORA77-201ENST00000408716 125 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 RN7SKP273-201ENST00000411392 314 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 TMBIM7P-201ENST00000418074 855 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 BX323845.1-201ENST00000432417 179 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AL450023.3-201ENST00000440592 271 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AL691482.1-201ENST00000453255 87 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 RPL7AP10-201ENST00000481016 791 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 SNORA76.2-201ENST00000517095 137 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC103833.1-201ENST00000517442 172 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AP002373.2-201ENST00000541631 1060 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 HAUS8P1-201ENST00000549005 542 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 NOP56P3-201ENST00000549457 385 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 RPAP2P1-201ENST00000603626 1168 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 TAS2R6P-201ENST00000605022 826 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC017076.1-201ENST00000607613 578 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC097504.2-201ENST00000608088 454 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AL096803.3-201ENST00000609032 532 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AC025016.1-201ENST00000616746 682 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 AP001002.2-201ENST00000625137 386 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH9Q9HC56 HSPA8P19-201ENST00000505359 1517 ntBASIC5.18□□□□□ -1.58
PCDH9Q9HC56 C4BPAP1-201ENST00000415474 1893 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC027228.2-201ENST00000567141 2154 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 RNU6-609P-201ENST00000365459 107 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 MORF4L1P7-201ENST00000426038 703 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 MTCO1P51-201ENST00000427672 1060 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 EEF1B2P5-201ENST00000444820 548 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC092647.2-201ENST00000452998 253 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC005532.2-201ENST00000467154 373 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC018635.1-201ENST00000468292 1030 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC098583.1-201ENST00000480875 255 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 RN7SL727P-201ENST00000482164 296 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 RPS4XP14-201ENST00000493072 781 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC008953.1-201ENST00000497334 318 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 TPT1P8-201ENST00000510120 555 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC016550.3-201ENST00000515706 767 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 RNU6-334P-201ENST00000517072 102 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 OR10G5P-201ENST00000532733 358 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC015922.4-201ENST00000612568 690 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC016597.2-201ENST00000613256 341 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC104763.3-201ENST00000613765 618 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC095038.2-201ENST00000621464 1070 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AC015722.2-201ENST00000622210 551 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 AP000943.4-201ENST00000622912 357 ntBASIC5.17□□□□□ -1.58
PCDH9Q9HC56 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms