Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RNU1-87P-201ENST00000363727 170 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 SNORD116.1-201ENST00000365628 92 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 SNORA16A-201ENST00000384342 137 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 GTF2IP2-201ENST00000424290 697 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC073410.1-201ENST00000435125 589 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 NECAP1P2-201ENST00000455668 727 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RNU1-88P-201ENST00000459274 128 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RN7SL799P-201ENST00000475891 298 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RPS4XP1-201ENST00000482189 787 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC119751.1-201ENST00000513357 765 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RNU6-759P-201ENST00000516740 103 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 OR7E18P-201ENST00000592589 702 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 SUGT1P3-202ENST00000604259 383 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC109347.2-201ENST00000610220 349 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AL162574.1-201ENST00000615702 950 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 AC138907.8-201ENST00000623981 2256 ntBASIC6.36□□□□□ -1.39
BCAS3Q9H6U6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC006042.3-201ENST00000454684 1469 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 GAPDHP24-201ENST00000328713 983 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 SNORD1C-201ENST00000363315 78 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 RNU6-157P-201ENST00000383957 107 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 SNORD65-201ENST00000391079 73 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 GSTA12P-201ENST00000402398 508 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL133325.1-201ENST00000421090 382 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC004074.1-201ENST00000421810 1063 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 LINC00888-204ENST00000487386 421 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC008565.1-201ENST00000509046 885 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 snoU109.5-201ENST00000516231 132 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC011611.5-201ENST00000552477 578 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC074051.3-201ENST00000570238 358 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL133370.2-201ENST00000619934 439 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 MIR6730-201ENST00000622213 67 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AL160394.1-201ENST00000624765 724 ntBASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
BCAS3Q9H6U6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms