Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ZNF663P-202ENST00000641770 1131 ntBASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.35□□□□□ -1.55
AMBRA1Q9C0C7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC006042.3-201ENST00000454684 1469 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 RNU4-7P-201ENST00000364758 141 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-244P-201ENST00000391028 104 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 PEX12P1-201ENST00000400284 1048 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 MTND4P22-201ENST00000413116 1169 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 QRSL1P2-201ENST00000418582 964 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 PTP4A1P5-201ENST00000420305 455 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AL365203.2-201ENST00000423444 196 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 TNPO1P1-201ENST00000423641 1138 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC073143.1-201ENST00000436316 395 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 GAPDHP48-201ENST00000436626 961 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC002542.1-201ENST00000440683 193 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC073648.4-201ENST00000442655 781 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC007327.1-201ENST00000447461 264 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC110749.1-201ENST00000462007 357 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC023194.2-201ENST00000465398 406 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC091860.1-201ENST00000505723 432 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC117532.1-201ENST00000514638 323 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 C1GALT1P3-201ENST00000522049 819 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 TRIM77BP-201ENST00000524985 1119 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC109635.6-201ENST00000525487 1113 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AP003033.1-201ENST00000527244 415 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 PDCL2P2-201ENST00000533651 189 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 DUX4L52-201ENST00000549363 777 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC068305.2-201ENST00000550567 1205 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 OR11H3P-201ENST00000554547 982 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC007956.1-201ENST00000555623 542 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 RPA2P1-201ENST00000556557 721 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC091078.2-201ENST00000557145 559 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC090888.1-201ENST00000561335 1141 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AP005119.1-201ENST00000580956 292 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 MIR4660-201ENST00000583549 74 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC090236.2-201ENST00000587933 1101 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 MRPS35P3-201ENST00000603189 709 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 NANOGP3-201ENST00000605855 286 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AL139099.4-201ENST00000614802 114 ntBASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AMBRA1Q9C0C7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.34□□□□□ -1.56
AMBRA1Q9C0C7 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 ZNF733P-202ENST00000444809 1573 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 CASC19-281ENST00000642118 1554 ntBASIC5.33□□□□□ -1.56
AMBRA1Q9C0C7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms