Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SCARNA6.1-201ENST00000516989 238 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 RPL12P22-201ENST00000519073 490 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 SULT1C2P2-201ENST00000562517 294 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC009120.3-201ENST00000563335 499 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC012435.1-202ENST00000568772 240 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC011260.1-201ENST00000578420 472 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 DYNLL1P1-201ENST00000595442 269 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 WISP1-OT1-201ENST00000602893 642 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC245297.2-201ENST00000610119 565 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC098679.5-201ENST00000624394 571 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC099654.6-201ENST00000636487 512 ntBASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM55Q9BYV6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC092162.3-201ENST00000624511 1624 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 NPM1P11-201ENST00000417106 855 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC015977.1-201ENST00000418887 292 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL590399.4-201ENST00000436561 601 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 COL11A2P1-205ENST00000441798 676 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 RPS10P18-201ENST00000442662 495 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 MORF4-201ENST00000447135 971 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 NF1P3-201ENST00000457709 450 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 RPL21P71-201ENST00000465598 459 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 SETP11-201ENST00000473027 690 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC104685.1-201ENST00000502445 371 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 NDUFA5P2-201ENST00000519723 344 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 TOMM20P1-201ENST00000534518 427 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 TRAV15-201ENST00000556680 249 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 RN7SL208P-201ENST00000577964 296 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL589765.6-201ENST00000601909 549 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC006270.3-201ENST00000605967 1036 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL354760.1-201ENST00000608357 643 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AL158063.1-201ENST00000615349 536 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 MIR6721-201ENST00000617181 87 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC008443.7-201ENST00000622195 246 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 CR392039.4-201ENST00000624968 501 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 OR2L1P-202ENST00000641567 1023 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC134882.1-201ENST00000603738 1676 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 NLRP3P1-201ENST00000622303 1785 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 ZNF833P-201ENST00000424938 1494 ntBASIC6.28□□□□□ -1.4
TRIM55Q9BYV6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms