Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC022905.1-201ENST00000503430 3048 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC005618.1-201ENST00000606901 3148 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 TNPO1P2-201ENST00000426249 2665 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 PABPC1P9-201ENST00000426076 1612 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 AC062022.1-201ENST00000451026 1684 ntBASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSBP3Q9BWW4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC022034.1-201ENST00000512867 2156 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 OR2M1P-201ENST00000318104 951 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RPL11P4-201ENST00000332269 436 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RN7SKP187-201ENST00000365536 330 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC007068.1-201ENST00000396690 844 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RPS3AP23-201ENST00000401762 784 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RPL7P58-201ENST00000402913 758 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 CCNG1P1-201ENST00000406783 885 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RPL24P2-201ENST00000421023 475 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 FABP7P1-201ENST00000424004 391 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 VN1R20P-201ENST00000425215 966 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ARMC4P1-201ENST00000438905 707 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 UBE2V1P3-201ENST00000439651 417 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ARL5AP2-201ENST00000444698 533 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC002075.1-201ENST00000457396 676 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 RPL23AP64-201ENST00000469465 435 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC079841.1-201ENST00000481228 950 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 GM2AP2-201ENST00000491764 562 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 MTCYBP18-201ENST00000501056 747 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC091965.3-201ENST00000506236 208 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 IGHV3-32-201ENST00000519182 355 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC024405.1-201ENST00000532521 1042 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 OR7K1P-201ENST00000546439 926 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 PCMTD1P2-201ENST00000565017 355 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SNORA74.4-201ENST00000607595 199 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC005962.2-201ENST00000611427 652 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC011472.4-201ENST00000615848 491 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AL158209.2-201ENST00000619266 216 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 MIR6806-201ENST00000622141 64 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AC124864.2-201ENST00000624736 186 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 CR383658.2-201ENST00000547576 1525 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SAGE3P-201ENST00000619800 1635 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 SNX18P3-202ENST00000565670 1750 ntBASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSBP3Q9BWW4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms