Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 AP000894.4-201ENST00000610185 483 ntBASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 AC120057.5-201ENST00000623840 154 ntBASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 AL031985.3-201ENST00000565390 2449 ntBASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 AP005139.1-201ENST00000580702 1647 ntBASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.22□□□□□ -1.25
TRAIPQ9BWF2 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 TATDN2P3-201ENST00000452855 3665 ntBASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
TRAIPQ9BWF2 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RNU1-84P-201ENST00000365447 164 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RNU6-146P-201ENST00000384602 108 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC245452.2-201ENST00000435222 392 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 TRIM60P18-201ENST00000441518 828 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 EIF4A1P11-201ENST00000451239 222 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RNA5SP269-201ENST00000459032 137 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 MEMO1P3-201ENST00000459811 302 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RPS27P20-201ENST00000492051 246 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RN7SL362P-201ENST00000494228 267 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC018645.1-201ENST00000505003 109 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC091874.2-201ENST00000505889 720 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 RNU6-941P-201ENST00000516346 108 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC027667.1-201ENST00000545814 304 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 NMNAT1P1-201ENST00000554095 876 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AGGF1P8-201ENST00000562979 1000 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC018552.3-201ENST00000567416 561 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC004232.1-201ENST00000571388 208 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 MIR4637-201ENST00000582405 84 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC079089.3-201ENST00000603094 673 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC115286.1-201ENST00000604298 434 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC239868.4-201ENST00000608318 671 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AC025594.3-201ENST00000613068 790 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AL683826.1-201ENST00000624104 627 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 MFSD8-239ENST00000641590 2479 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 AP001284.1-201ENST00000528393 2118 ntBASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
TRAIPQ9BWF2 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC135352.1-201ENST00000506173 1418 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AC114786.1-201ENST00000512892 1415 ntBASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRAIPQ9BWF2 AL391261.1-201ENST00000555712 1479 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms