Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL355852.1-201ENST00000454081 1771 ntBASIC3.96□□□□□ -1.78
HDHD3Q9BSH5 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HDHD3Q9BSH5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HDHD3Q9BSH5 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HDHD3Q9BSH5 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AP001002.1-201ENST00000625148 1513 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AP000534.2-201ENST00000412729 568 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 ARAFP2-201ENST00000440565 559 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC079168.2-201ENST00000453977 416 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RPL37AP8-201ENST00000494116 276 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RPL7L1P4-201ENST00000513004 707 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RN7SKP147-201ENST00000517154 244 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 ATP5J2P6-201ENST00000565203 266 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC022726.1-201ENST00000587475 207 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC073137.1-201ENST00000605636 634 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC004232.3-201ENST00000622977 525 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC004808.2-201ENST00000627965 773 ntBASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HDHD3Q9BSH5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CASC19-204ENST00000641001 2055 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 DDX18P4-201ENST00000511690 1966 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 TTC39DP-201ENST00000416781 1688 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 OR56B2P-201ENST00000317102 954 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 IL6STP1-201ENST00000346911 1020 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RNU1-20P-201ENST00000363314 162 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AL589647.1-201ENST00000402485 466 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RN7SKP273-201ENST00000411392 314 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC013470.3-201ENST00000420252 1194 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 GLUD1P9-201ENST00000420997 1173 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC007064.3-201ENST00000422608 359 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 OR2B7P-201ENST00000429302 934 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AL392003.1-201ENST00000434394 243 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 SLC25A18P1-201ENST00000449385 454 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC005008.1-201ENST00000456151 612 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 snoU13.20-201ENST00000459180 104 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 ATP5G1P3-201ENST00000463301 410 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RN7SL817P-201ENST00000480777 288 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC008953.1-201ENST00000497334 318 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC117525.1-201ENST00000515228 503 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 CYCSP28-201ENST00000534284 321 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 GCSHP4-201ENST00000538792 439 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 RPL21P7-201ENST00000557463 483 ntBASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.94□□□□□ -1.78
HDHD3Q9BSH5 AC009268.1-201ENST00000561352 1203 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms