Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC073052.1-201ENST00000440417 714 ntBASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CSMD1Q96PZ7 AC092681.1-201ENST00000297369 291 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 RNA5SP453-201ENST00000362503 119 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AL162151.2-201ENST00000448875 158 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 RN7SL197P-201ENST00000466981 299 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AL139095.1-201ENST00000404326 391 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 PPIAP13-201ENST00000434706 478 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC116312.1-201ENST00000606841 314 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC090912.3-201ENST00000609775 533 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 U3.53-201ENST00000628922 216 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 PARP4P3-201ENST00000510265 317 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC016559.2-201ENST00000510759 359 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 TVP23BP1-201ENST00000557500 617 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CSMD1Q96PZ7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 PAICSP4-201ENST00000517543 1253 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 DUXAP2-201ENST00000519198 589 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AL161729.3-201ENST00000603533 673 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC007546.1-201ENST00000619452 559 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC100778.3-201ENST00000580060 1750 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 RNA5SP241-201ENST00000391326 114 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC010653.1-201ENST00000571108 881 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 AC005412.1-201ENST00000580812 1049 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 FAM27D1-201ENST00000612308 341 ntBASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CSMD1Q96PZ7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms