Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC073143.1-201ENST00000436316 395 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC112206.1-201ENST00000468416 477 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 RPL23AP37-201ENST00000479658 549 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC013356.1-201ENST00000489027 564 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC083829.1-201ENST00000503756 657 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC134698.5-201ENST00000519444 336 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC7Q96M83 RPL12P25-202ENST00000598100 674 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC103792.1-201ENST00000603591 919 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 MLECP1-201ENST00000615893 709 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AL121873.1-201ENST00000616013 524 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 OR52H1-202ENST00000641796 1061 ntBASIC6.5□□□□□ -1.37
CCDC7Q96M83 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC7Q96M83 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC7Q96M83 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 RNA5SP397-201ENST00000391323 118 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 ATG4AP1-201ENST00000416893 538 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 RPL12P34-201ENST00000424532 479 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 PPIAP21-201ENST00000464473 501 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC090142.1-201ENST00000465776 462 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC007537.2-201ENST00000472093 511 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC092653.1-201ENST00000608509 531 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC005962.2-201ENST00000611427 652 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC005899.7-201ENST00000618199 588 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC011815.3-201ENST00000624194 473 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AC068724.3-201ENST00000625906 87 ntBASIC6.49□□□□□ -1.37
CCDC7Q96M83 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC7Q96M83 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC7Q96M83 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 AC012519.1-201ENST00000424588 610 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 RPL21P43-201ENST00000425440 472 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 AC023141.6-201ENST00000429418 337 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 NIP7P2-201ENST00000485801 544 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 RPS4XP18-201ENST00000495480 763 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 MTCO1P15-201ENST00000529569 1526 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 OR56B2P-202ENST00000641377 2453 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 AP001642.1-201ENST00000624727 2117 ntBASIC6.48□□□□□ -1.37
CCDC7Q96M83 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC7Q96M83 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC7Q96M83 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 RN7SKP227-201ENST00000364445 330 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 AL732292.1-201ENST00000426692 226 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 ARL2BPP10-201ENST00000446487 531 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC7Q96M83 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 AC025674.1-201ENST00000507074 324 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 RN7SL652P-201ENST00000577769 300 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 MIR3160-1-201ENST00000577972 85 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC7Q96M83 AC125494.2-201ENST00000602431 657 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 AC005191.1-201ENST00000603950 358 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 OR7A19P-201ENST00000608051 733 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 AC125257.1-201ENST00000560400 2930 ntBASIC6.47□□□□□ -1.37
CCDC7Q96M83 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms