Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC051619.2-201ENST00000559063 397 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC011374.2-201ENST00000607135 526 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC008147.4-201ENST00000617570 1204 ntBASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4CQ96CF2 AC100757.1-201ENST00000616872 1835 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 HMGB3P7-201ENST00000400214 611 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC233289.1-201ENST00000403700 508 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 RPL5P19-201ENST00000404228 893 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AL390774.1-201ENST00000411924 246 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 RNU6-276P-201ENST00000516114 96 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AP001372.4-201ENST00000524889 472 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 MTND1P24-201ENST00000552175 861 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 SS18L2P2-201ENST00000583960 235 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC093673.2-201ENST00000609674 331 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC022079.2-201ENST00000619739 566 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AP000770.2-201ENST00000623694 100 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC021106.3-201ENST00000623925 531 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC008993.2-201ENST00000631744 806 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 TCP11X1-202ENST00000622971 1372 ntBASIC6.43□□□□□ -1.38
CHMP4CQ96CF2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 MTCO1P15-201ENST00000529569 1526 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 CR788268.1-201ENST00000603931 1809 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 RNA5SP335-201ENST00000363817 110 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 RPS27AP11-201ENST00000402798 447 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL133325.1-201ENST00000421090 382 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 RRM2P4-201ENST00000441721 562 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AL672138.1-201ENST00000450604 1015 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 OFD1P3Y-201ENST00000453312 783 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 Z95152.1-201ENST00000453556 656 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 RPL7P45-201ENST00000455851 743 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 OR2AO1P-201ENST00000476497 403 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 HIGD1AP14-201ENST00000507617 282 ntBASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.42□□□□□ -1.38
CHMP4CQ96CF2 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms