Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TRAV35-201ENST00000390462 330 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC025750.1-201ENST00000399891 379 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 TDGF1P1-201ENST00000445734 527 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC114755.5-201ENST00000447760 831 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AP003730.1-201ENST00000524605 285 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC006349.1-201ENST00000555526 235 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC006130.2-201ENST00000586202 326 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 AC090948.2-201ENST00000607363 564 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 MIR92B-201ENST00000607575 96 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.67□□□□□ -1.5
SNED1Q8TER0 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SNED1Q8TER0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.67□□□□□ -1.5
SNED1Q8TER0 AL031119.1-201ENST00000404707 1879 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 OR1F12-201ENST00000402365 945 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 SEC63P1-201ENST00000425785 1258 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 NUTF2P3-201ENST00000448540 384 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 PPM1AP1-201ENST00000502740 1135 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 HMGB1P23-201ENST00000518743 568 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC005868.1-201ENST00000536421 331 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 CCDC58P3-201ENST00000590792 430 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 BNIP3P22-201ENST00000593399 556 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 BNIP3P33-201ENST00000598912 569 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC073137.1-201ENST00000605636 634 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC022960.2-201ENST00000616300 666 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 AL109620.1-201ENST00000618738 1197 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 BX005214.3-202ENST00000619809 325 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SNED1Q8TER0 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 AC025031.4-201ENST00000621248 3271 ntBASIC5.66□□□□□ -1.5
SNED1Q8TER0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.66□□□□□ -1.5
SNED1Q8TER0 RNA5SP366-201ENST00000365454 123 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 PPIAP31-201ENST00000405422 495 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 RPL34P6-201ENST00000432390 345 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 BMS1P19-201ENST00000433925 393 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AL451139.1-201ENST00000434718 346 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 RPL23AP93-201ENST00000440847 484 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC034236.1-201ENST00000469891 373 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC128716.1-201ENST00000475129 166 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC104763.1-201ENST00000475274 360 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC023424.1-201ENST00000496058 459 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 RPL23AP53-201ENST00000521854 457 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 AL049830.4-201ENST00000555149 351 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 MTATP6P25-201ENST00000574491 261 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 MIR4429-201ENST00000580105 73 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 AC245389.1-201ENST00000605141 529 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 AP000240.1-201ENST00000609910 452 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 MAPK10-328ENST00000641553 4009 ntBASIC5.65□□□□□ -1.5
SNED1Q8TER0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.65□□□□□ -1.5
SNED1Q8TER0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SNED1Q8TER0 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNED1Q8TER0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNED1Q8TER0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
SNED1Q8TER0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SNED1Q8TER0 RNU1-64P-201ENST00000365443 163 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 MIR23B-201ENST00000384832 97 ntBASIC5.65□□□□□ -1.51
SNED1Q8TER0 RPL23AP26-201ENST00000412728 464 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms