Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GABARAPL3-201ENST00000412799 354 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CEACAMP8-201ENST00000413902 580 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RPL6P29-201ENST00000414863 865 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CYCSP10-201ENST00000417973 294 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RGS17P1-201ENST00000423358 553 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 EI24P4-201ENST00000423683 1078 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MTND4LP13-201ENST00000425022 298 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MTCO1P57-201ENST00000432182 261 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CYCSP6-201ENST00000434498 302 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MTND2P2-201ENST00000434633 945 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC093716.1-201ENST00000435923 377 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AL390119.1-201ENST00000440329 312 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 Z80107.2-201ENST00000445127 392 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RANP1-206ENST00000455094 651 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RPS17P2-201ENST00000461663 408 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC007688.1-201ENST00000475592 759 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 ELOCP28-201ENST00000590044 317 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC005229.3-201ENST00000603438 323 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC012467.1-201ENST00000607740 256 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC019131.2-201ENST00000609071 870 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC004948.1-201ENST00000609858 672 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AL158196.1-201ENST00000616786 434 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 LINC00216-201ENST00000623548 1126 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AL691477.1-201ENST00000624398 162 ntBASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71LQ8N9Z2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 PHKBP1-201ENST00000450951 1951 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 MT-TP-201ENST00000387461 68 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AL590806.1-201ENST00000415818 853 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 TRIM60P13-201ENST00000432350 1283 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 SUMO2P3-201ENST00000438311 288 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC004938.1-201ENST00000438468 308 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC114878.1-201ENST00000441166 358 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 IFNWP4-201ENST00000453148 294 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 RPS21P4-201ENST00000487122 248 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AL136038.1-201ENST00000497246 351 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC083829.1-201ENST00000503756 657 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC074087.1-201ENST00000512059 724 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC012339.2-201ENST00000523996 453 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC074029.2-201ENST00000551045 634 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC079075.1-201ENST00000559543 878 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 AC018552.3-201ENST00000567416 561 ntBASIC4.09□□□□□ -1.75
CCDC71LQ8N9Z2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms