Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 CDY12P-201ENST00000440679 1015 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 SETD6P1-201ENST00000444575 317 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 CDY13P-201ENST00000445813 1015 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 RN7SL319P-201ENST00000480656 221 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ZNF971P-201ENST00000562068 1249 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC018558.5-201ENST00000565840 952 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC091042.1-201ENST00000579213 173 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 ZNF92P3-201ENST00000596594 954 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC110760.3-201ENST00000598794 467 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC018926.1-201ENST00000616335 435 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC074276.2-201ENST00000619891 348 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AP003485.2-201ENST00000623636 610 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC005618.4-201ENST00000625053 554 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNE4Q8N205 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC120338.1-201ENST00000625074 1541 ntBASIC6.34□□□□□ -1.39
SYNE4Q8N205 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.34□□□□□ -1.39
SYNE4Q8N205 ABCC13-202ENST00000463099 3842 ntBASIC6.34□□□□□ -1.4
SYNE4Q8N205 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE4Q8N205 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SYNE4Q8N205 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
SYNE4Q8N205 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AMZ2P2-201ENST00000406819 1057 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AL354868.1-201ENST00000417077 482 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC138761.5-201ENST00000433967 325 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AL161722.2-201ENST00000434731 981 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC073143.1-201ENST00000436316 395 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 RN7SL443P-201ENST00000464331 290 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 KCTD9P6-201ENST00000522306 950 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AL110118.1-201ENST00000553543 400 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 PARP1P2-201ENST00000556806 195 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 AC006210.2-201ENST00000367074 1545 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.33□□□□□ -1.4
SYNE4Q8N205 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNE4Q8N205 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNE4Q8N205 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SYNE4Q8N205 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNE4Q8N205 AC068538.1-201ENST00000376856 336 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 SNORA77-201ENST00000408716 125 ntBASIC6.32□□□□□ -1.4
SYNE4Q8N205 HIGD1AP15-201ENST00000416198 280 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms