Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AP001052.1-201ENST00000626421 99 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF135Q8IUD6 AC092111.1-201ENST00000618256 3358 ntBASIC7.36□□□□□ -1.23
RNF135Q8IUD6 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 RNU6-332P-201ENST00000391193 108 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AL390316.1-201ENST00000406279 553 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 VN1R8P-201ENST00000407739 893 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 Y_RNA.608-201ENST00000410647 95 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 RN7SKP222-201ENST00000410651 315 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC007390.1-201ENST00000415722 356 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC017078.1-201ENST00000416146 368 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 HMGB3P20-201ENST00000417997 600 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 GEMIN2P2-201ENST00000418195 715 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 USP9YP36-201ENST00000424581 829 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC002486.1-201ENST00000435098 391 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 RPSAP7-201ENST00000456871 885 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC008967.1-201ENST00000504843 163 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC112225.1-201ENST00000508230 297 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC093809.1-201ENST00000509155 340 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 IGLVIV-64-201ENST00000518581 301 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC006512.2-201ENST00000543250 486 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 MIR4307-201ENST00000582802 84 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AL035413.2-201ENST00000604801 525 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AL121950.1-201ENST00000624993 2077 ntBASIC7.35□□□□□ -1.23
RNF135Q8IUD6 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF135Q8IUD6 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC011008.2-201ENST00000624866 3352 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF135Q8IUD6 Y_RNA.142-201ENST00000363491 102 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 RN7SKP78-201ENST00000364711 318 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 MIR506-201ENST00000384998 124 ntBASIC7.34□□□□□ -1.23
RNF135Q8IUD6 FDPSP5-201ENST00000399474 1057 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms