Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RNU6-543P-201ENST00000362576 108 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RNA5SP326-201ENST00000363209 110 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RNU6-666P-201ENST00000363499 107 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RNU6-549P-201ENST00000384433 107 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC005042.1-201ENST00000393397 800 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 OOSP1-201ENST00000398992 1270 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL034374.1-201ENST00000406329 351 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL590084.1-201ENST00000407885 387 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC105402.1-201ENST00000413336 545 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 OR4K6P-201ENST00000416478 897 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 Z75741.2-201ENST00000417272 1167 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL008629.1-201ENST00000438615 184 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 RPS23P2-201ENST00000463671 415 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC098847.1-201ENST00000473094 348 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC099521.1-201ENST00000482557 334 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 PRMT5P1-201ENST00000514351 598 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 snoZ278.1-201ENST00000517059 112 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 MTCO1P47-201ENST00000523889 1271 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC087373.1-201ENST00000524920 491 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC027104.1-201ENST00000563702 681 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC138207.8-204ENST00000579588 527 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 MIR4502-201ENST00000580432 81 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 COX6CP7-201ENST00000597056 208 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC146944.4-201ENST00000602697 718 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL583856.2-201ENST00000606298 543 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC092266.1-201ENST00000610958 165 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 VN1R74P-201ENST00000613259 503 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC011472.4-201ENST00000615848 491 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC139769.3-201ENST00000618383 175 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC024884.1-201ENST00000620583 399 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SEC63P2-201ENST00000503863 1939 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AC104446.1-201ENST00000613728 1321 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 QRSL1P1-201ENST00000400977 1540 ntBASIC5.18□□□□□ -1.58
PTCHD4Q6ZW05 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 Z95331.1-201ENST00000623075 23112 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 AC083843.2-201ENST00000568248 6253 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 ENSAP3-201ENST00000312710 333 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RNA5SP232-201ENST00000364144 119 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 RN7SKP171-201ENST00000364417 303 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 SNORD116.1-201ENST00000365628 92 ntBASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD4Q6ZW05 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms