Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 AC126323.6-202ENST00000568092 3511 ntBASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 MFSD8-216ENST00000641147 4009 ntBASIC4.56□□□□□ -1.68
H3F3CQ6NXT2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 RNA5SP345-201ENST00000410646 108 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AL590609.2-201ENST00000421430 368 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AP000936.3-201ENST00000438127 255 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC137768.1-201ENST00000549998 553 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC006349.1-201ENST00000555526 235 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC116553.2-201ENST00000564203 463 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 MIR4270-201ENST00000581799 70 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 MIR6748-201ENST00000610433 71 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 MIR6780A-201ENST00000615089 68 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 AC022106.2-201ENST00000620114 757 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 SAMMSON-226ENST00000642089 1582 ntBASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
H3F3CQ6NXT2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC079741.1-201ENST00000321498 212 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 CYB5AP4-201ENST00000396692 399 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC114755.2-201ENST00000413520 361 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC022022.1-201ENST00000430304 178 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AL138878.2-201ENST00000440581 1241 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AP000942.1-201ENST00000463969 747 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC011005.3-201ENST00000491624 395 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 BTG4P1-201ENST00000510421 183 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 snoU109.6-201ENST00000516831 118 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 BNIP3P1-201ENST00000547295 580 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 CR383656.6-201ENST00000550518 394 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AL512782.1-201ENST00000603093 364 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC087283.1-201ENST00000604029 1074 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC010424.2-201ENST00000607594 443 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AC007497.1-201ENST00000610421 561 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 AL161616.1-201ENST00000611867 286 ntBASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.54□□□□□ -1.68
H3F3CQ6NXT2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 NRBF2P3-201ENST00000432731 865 ntBASIC4.53□□□□□ -1.68
H3F3CQ6NXT2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms