Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 MIR3936-201ENST00000584304 110 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AL158211.2-201ENST00000607282 395 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AC023813.4-201ENST00000607580 580 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AC118658.2-201ENST00000618697 459 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AC006249.1-201ENST00000621223 471 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 AL731532.2-201ENST00000623542 1953 ntBASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX30Q5VWJ9 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX30Q5VWJ9 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 RN7SKP153-201ENST00000365026 316 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC016769.2-201ENST00000414815 475 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 OR6C64P-201ENST00000419708 825 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 OR5M12P-201ENST00000423388 929 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL161722.2-201ENST00000434731 981 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 CLUHP1-201ENST00000435012 1190 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AP000949.1-201ENST00000438328 629 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 RN7SL610P-201ENST00000463845 291 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL049829.1-201ENST00000465411 156 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 RN7SL97P-201ENST00000486780 299 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 NDUFA5P12-201ENST00000503796 343 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL671862.1-201ENST00000515851 349 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 HAUS1P3-201ENST00000523909 662 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC092490.3-201ENST00000545370 572 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC092574.1-201ENST00000609771 420 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC097460.3-201ENST00000623099 442 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 AC024023.1-201ENST00000624530 922 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 THAP12P4-201ENST00000528321 2266 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX30Q5VWJ9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 RNU1-74P-201ENST00000384108 171 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 SNORA48.4-201ENST00000391089 134 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 RPS27AP11-201ENST00000402798 447 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 PTGES3P2-201ENST00000407942 482 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 UBE2V1P11-201ENST00000411559 285 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 NPM1P22-201ENST00000427761 952 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 AC012497.1-201ENST00000429392 575 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 VN1R54P-201ENST00000435210 1049 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 PSMD10P3-201ENST00000437000 448 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 NOP56P2-201ENST00000447491 769 ntBASIC5.45□□□□□ -1.54
SNX30Q5VWJ9 SBDSP1-204ENST00000453858 737 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms