Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 AC087045.3-201ENST00000623046 2468 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 XPOTP1-201ENST00000443317 2398 ntBASIC8.11□□□□□ -1.11
VARS2Q5ST30 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VARS2Q5ST30 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.11□□□□□ -1.11
VARS2Q5ST30 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 XRCC6P2-201ENST00000457831 1822 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL049780.3-201ENST00000624612 1583 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 LINC00294-201ENST00000631190 3306 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 OR11H5P-202ENST00000641612 1325 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 Y_RNA.122-201ENST00000363331 96 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 Y_RNA.212-201ENST00000364177 102 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 RNA5SP302-201ENST00000364896 100 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 Y_RNA.428-201ENST00000384078 102 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL139184.1-202ENST00000422303 222 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 FECHP1-201ENST00000431896 1214 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 NIP7P1-201ENST00000433227 512 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC112492.4-201ENST00000456549 352 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL049874.2-201ENST00000492636 288 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 GAPDHP61-201ENST00000507324 1005 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC004062.1-201ENST00000509926 645 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 RNU4ATAC7P-201ENST00000516280 125 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 SNORA72.7-201ENST00000516349 94 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 RNA5SP135-201ENST00000517019 125 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 SNX18P27-201ENST00000523611 779 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 OR5M2P-201ENST00000529003 936 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC108451.2-201ENST00000603875 538 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL354984.3-201ENST00000604803 325 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL391903.2-201ENST00000614532 247 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC129908.1-201ENST00000624553 648 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AC010149.2-201ENST00000637608 315 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC8.1□□□□□ -1.11
VARS2Q5ST30 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL357556.1-201ENST00000421884 1388 ntBASIC8.1□□□□□ -1.11
VARS2Q5ST30 AL031123.2-201ENST00000563225 3325 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC235565.1-201ENST00000456962 1325 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL161891.1-201ENST00000621575 4636 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 TMSB4XP2-201ENST00000335179 210 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Y_RNA.25-201ENST00000362528 102 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Y_RNA.46-201ENST00000362695 102 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Y_RNA.416-201ENST00000384014 113 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Y_RNA.424-201ENST00000384063 103 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 Y_RNA.485-201ENST00000384395 102 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 RNU6-328P-201ENST00000390887 106 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPSAP72-201ENST00000407020 358 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 RAC1P3-201ENST00000416129 580 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 VDAC1P10-201ENST00000416715 891 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPL7L1P10-201ENST00000427790 463 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPS27AP15-201ENST00000447672 466 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 SLC25A18P1-201ENST00000449385 454 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AL031736.1-201ENST00000449688 618 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC8.09□□□□□ -1.11
VARS2Q5ST30 RPSAP51-201ENST00000497462 645 ntBASIC8.09□□□□□ -1.11
VARS2Q5ST30 AC095059.2-201ENST00000510601 933 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms