Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL049539.1-201ENST00000611964 459 ntBASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 AF117829.2-201ENST00000619538 361 ntBASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.91□□□□□ -1.62
PTPN20Q4JDL3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PTPN20Q4JDL3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PTPN20Q4JDL3 AC135352.1-201ENST00000506173 1418 ntBASIC4.9□□□□□ -1.62
PTPN20Q4JDL3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
PTPN20Q4JDL3 AL359643.1-201ENST00000404109 423 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 OR6C64P-201ENST00000419708 825 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 Z74021.1-201ENST00000423610 407 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 RPL34P6-201ENST00000432390 345 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 RPL23AP37-201ENST00000479658 549 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC111000.5-201ENST00000506559 1178 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC018552.1-201ENST00000562099 811 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 MIR4480-201ENST00000582492 71 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC005520.3-201ENST00000602874 370 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 COX6CP4-201ENST00000605798 228 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 Mico1.1-201ENST00000611698 204 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 SAMMSON-213ENST00000641336 1521 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 AC097461.1-201ENST00000568928 2821 ntBASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PTPN20Q4JDL3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL672167.2-201ENST00000377164 879 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 RPL21P43-201ENST00000425440 472 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 RPS26P2-201ENST00000440331 348 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 RPS4XP18-201ENST00000495480 763 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AL159169.2-201ENST00000610061 1269 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC234782.5-201ENST00000617723 324 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AP001784.1-201ENST00000624107 428 ntBASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN20Q4JDL3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 AL355852.1-201ENST00000454081 1771 ntBASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 AL391684.1-202ENST00000641293 1636 ntBASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 OR56B2P-201ENST00000317102 954 ntBASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 RN7SKP97-201ENST00000410966 333 ntBASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 AL645937.3-201ENST00000453647 936 ntBASIC4.88□□□□□ -1.63
PTPN20Q4JDL3 RPL12P20-201ENST00000475538 479 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms