Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNU6-236P-201ENST00000363886 106 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNA5SP435-201ENST00000364044 108 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNU6-549P-201ENST00000384433 107 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNU6-178P-201ENST00000384631 104 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 GPS2P1-201ENST00000411761 986 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 CYCSP12-201ENST00000437729 300 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL591363.1-201ENST00000450091 483 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AP000797.2-201ENST00000475768 606 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC021193.1-201ENST00000511607 420 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 PRELID3BP4-201ENST00000515476 571 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC124293.1-201ENST00000530034 493 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC006518.2-201ENST00000542513 940 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RBM22P1-201ENST00000578589 1214 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 MIR4509-3-201ENST00000578671 94 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 MIR4509-2-201ENST00000583920 94 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC011445.2-201ENST00000599274 173 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL606834.3-201ENST00000602615 496 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC009948.4-201ENST00000604692 675 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC005377.1-201ENST00000605126 456 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC090912.3-201ENST00000609775 533 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 MIR4509-1-201ENST00000618224 94 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 ATE1-AS1-202ENST00000636460 506 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 LINC01808-202ENST00000641680 1116 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AL078621.3-201ENST00000623707 2042 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AC106754.1-201ENST00000562632 1513 ntBASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PRICKLE4Q2TBC4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 SNORA51.12-201ENST00000384448 134 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RNU1-77P-201ENST00000390868 162 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 OR4K12P-201ENST00000406538 961 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 OR3A2-201ENST00000408891 1076 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RNA5SP487-201ENST00000410186 122 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RN7SKP206-201ENST00000410823 293 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 MTND4P11-201ENST00000417020 1058 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RPL7AP49-201ENST00000429522 581 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AL591438.1-201ENST00000433508 581 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 MRPL35P2-201ENST00000448009 511 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AL606490.1-201ENST00000452266 765 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AC058823.1-201ENST00000485315 474 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RPSAP51-201ENST00000497462 645 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 RNU6-347P-201ENST00000516658 105 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 CDC42P3-201ENST00000518493 633 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 AC104417.1-201ENST00000523974 751 ntBASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRICKLE4Q2TBC4 HMGB1P40-201ENST00000525121 540 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms