Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH1Q08174 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 DYNLL1P1-201ENST00000595442 269 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC005261.5-201ENST00000596280 355 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 PRELID3BP8-201ENST00000604148 295 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AL078624.2-201ENST00000605063 554 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC004241.2-201ENST00000614562 444 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 AC009159.1-201ENST00000618386 642 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH1Q08174 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 AL157700.1-201ENST00000561973 1432 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 AC013488.1-201ENST00000526618 1838 ntBASIC6.48□□□□□ -1.37
PCDH1Q08174 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH1Q08174 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH1Q08174 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 RN7SKP130-201ENST00000364924 301 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 RNA5SP152-201ENST00000365184 110 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PCDH1Q08174 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PCDH1Q08174 RNU6-1122P-201ENST00000384449 107 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 SNORD116-23-201ENST00000384645 92 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 RPS3AP36-201ENST00000398190 775 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 RNU4-55P-201ENST00000410731 137 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 RPS3AP3-201ENST00000411933 242 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 TMBIM7P-201ENST00000418074 855 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 BOLA3P4-201ENST00000418151 400 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL953862.1-201ENST00000423016 168 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 MTCO1P20-201ENST00000425366 358 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 NPM1P24-201ENST00000428039 894 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL590128.1-201ENST00000433407 286 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 LDHAP2-201ENST00000437325 985 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 RPL7P59-201ENST00000447700 943 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 TREML3P-201ENST00000457327 501 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 RPS20P24-201ENST00000457473 361 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 RPS7P10-201ENST00000464254 603 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL035404.1-201ENST00000497982 568 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC114981.1-201ENST00000503897 678 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC114786.4-201ENST00000508771 728 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC105914.1-201ENST00000511798 226 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.47□□□□□ -1.37
PCDH1Q08174 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH1Q08174 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AP003115.1-201ENST00000569849 463 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 MTCO3P13-201ENST00000577757 781 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC090312.2-201ENST00000582687 378 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH1Q08174 AC112191.3-201ENST00000604371 277 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AL009028.1-201ENST00000604895 802 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 AC069304.2-201ENST00000605154 435 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 MIR8082-201ENST00000612488 81 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 MIR6774-201ENST00000614651 70 ntBASIC6.47□□□□□ -1.37
PCDH1Q08174 MLECP1-201ENST00000615893 709 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms