Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 OR52B5P-201ENST00000435337 951 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC245047.2-201ENST00000441060 530 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 SCARNA10-201ENST00000459255 330 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 UBA52P7-201ENST00000486088 380 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AGGF1P3-201ENST00000493675 1213 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC106872.4-201ENST00000510050 523 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 RN7SKP34-201ENST00000516142 244 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 BMPR1APS2-201ENST00000527904 1012 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC026368.1-201ENST00000614934 690 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AL049794.2-201ENST00000616301 365 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 RMST_9.1-201ENST00000619945 193 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 AC012414.7-202ENST00000622705 1090 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 OR52B5P-202ENST00000641118 1110 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 ECM1P2-201ENST00000503354 1577 ntBASIC3.71□□□□□ -1.82
HIST1H1AQ02539 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HIST1H1AQ02539 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RNA5SP502-201ENST00000362694 119 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RNA5SP455-201ENST00000365190 119 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 MIR195-201ENST00000385194 87 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 MIR223-201ENST00000385204 110 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL592291.1-201ENST00000403830 352 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL136116.2-201ENST00000404020 785 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 DNAJA1P4-201ENST00000406473 1166 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 CHEK2P5-201ENST00000423877 246 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 HMGB3P10-201ENST00000434734 572 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 OR7E125P-201ENST00000443450 846 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 NDUFA5P8-201ENST00000449019 346 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC092647.2-201ENST00000452998 253 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL389915.2-201ENST00000454576 441 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RN7SL172P-201ENST00000460535 303 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RPS17P2-201ENST00000461663 408 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RN7SL41P-201ENST00000476144 297 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 HMGN2P25-201ENST00000486956 268 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RN7SL30P-201ENST00000488416 306 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RN7SL244P-201ENST00000493405 297 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 RPS6P4-201ENST00000494693 758 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 HIGD1AP14-201ENST00000507617 282 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ATP5LP3-201ENST00000514223 304 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 LDHBP3-201ENST00000514909 822 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC090819.1-201ENST00000523800 1111 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 OR4A46P-201ENST00000527255 933 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ATP5J2P6-201ENST00000565203 266 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 QTRT1P1-201ENST00000604344 1078 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC104687.2-201ENST00000604442 342 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC234782.5-201ENST00000617723 324 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 MIR4302-201ENST00000638058 60 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 NXF4-202ENST00000416098 1465 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 Z73965.1-201ENST00000623412 2297 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HIST1H1AQ02539 AC009643.2-201ENST00000603543 1448 ntBASIC3.7□□□□□ -1.82
HIST1H1AQ02539 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.69□□□□□ -1.82
HIST1H1AQ02539 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms