Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 UBBP2-201ENST00000376781 231 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HSPG2P98160 AL139095.1-201ENST00000404326 391 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 RPL7AP49-201ENST00000429522 581 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AL591438.1-201ENST00000433508 581 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 GAPDHP14-201ENST00000450472 937 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.76□□□□□ -1.97
HSPG2P98160 RPL35P6-201ENST00000490024 372 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC2.76□□□□□ -1.97
HSPG2P98160 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.76□□□□□ -1.97
HSPG2P98160 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
HSPG2P98160 OFD1P9Y-201ENST00000417699 1491 ntBASIC2.76□□□□□ -1.97
HSPG2P98160 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
HSPG2P98160 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 AC104260.2-201ENST00000623551 3497 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC079777.1-201ENST00000623836 1953 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC2.75□□□□□ -1.97
HSPG2P98160 RN7SKP185-201ENST00000362813 326 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 RN7SKP235-201ENST00000410662 305 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC104763.1-201ENST00000475274 360 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 RPL23AP94-201ENST00000512518 302 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC2.75□□□□□ -1.97
HSPG2P98160 AC090181.2-201ENST00000602975 672 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
HSPG2P98160 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.75□□□□□ -1.97
HSPG2P98160 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 NBPF8-201ENST00000583271 5330 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC073342.2-201ENST00000595842 1800 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 AL591363.1-201ENST00000450091 483 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 RN7SL293P-201ENST00000481765 281 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 DUXAP2-201ENST00000519198 589 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AP001804.2-201ENST00000533932 910 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 AL049830.4-201ENST00000555149 351 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC092354.2-201ENST00000607786 514 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 AC019176.2-201ENST00000611579 315 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HSPG2P98160 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 AC135352.1-201ENST00000506173 1418 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 MFSD13B-201ENST00000420133 1290 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 ISCUP1-201ENST00000454451 448 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.75□□□□□ -1.97
HSPG2P98160 RN7SKP157-201ENST00000516174 282 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 PYM1-205ENST00000547925 499 ntTSL 3 BASIC2.75□□□□□ -1.97
HSPG2P98160 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 AC116553.2-201ENST00000564203 463 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 MAPK10-372ENST00000641954 3413 ntBASIC2.75□□□□□ -1.97
HSPG2P98160 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
HSPG2P98160 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HSPG2P98160 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
HSPG2P98160 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
HSPG2P98160 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC2.75□□□□□ -1.97
HSPG2P98160 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms