Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.15□□□□□ -1.59
RAE1P78406 PRELID3BP4-201ENST00000515476 571 ntBASIC5.15□□□□□ -1.59
RAE1P78406 CDC42P3-201ENST00000518493 633 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AP004609.2-201ENST00000532177 190 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AP004607.2-201ENST00000533949 322 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC025260.1-201ENST00000548858 430 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC023813.2-201ENST00000564321 469 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 AC008088.1-201ENST00000580993 280 ntBASIC5.15□□□□□ -1.59
RAE1P78406 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAE1P78406 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAE1P78406 MIR4505-201ENST00000582238 73 ntBASIC5.15□□□□□ -1.59
RAE1P78406 SS18L2P2-201ENST00000583960 235 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC002069.2-201ENST00000603580 883 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.15□□□□□ -1.59
RAE1P78406 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.15□□□□□ -1.59
RAE1P78406 STMN1P1-201ENST00000617809 440 ntBASIC5.15□□□□□ -1.59
RAE1P78406 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.15□□□□□ -1.59
RAE1P78406 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.15□□□□□ -1.59
RAE1P78406 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 AC111188.2-201ENST00000529697 1387 ntBASIC5.15□□□□□ -1.59
RAE1P78406 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAE1P78406 CCT8P1-201ENST00000413611 1657 ntBASIC5.15□□□□□ -1.59
RAE1P78406 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.15□□□□□ -1.59
RAE1P78406 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.15□□□□□ -1.59
RAE1P78406 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 GTF2H2B-203ENST00000508065 1432 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 ZNF876P-202ENST00000398732 1485 ntBASIC5.14□□□□□ -1.59
RAE1P78406 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 ENSAP3-201ENST00000312710 333 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RNU6-543P-201ENST00000362576 108 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RNU6-353P-201ENST00000364266 108 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RNA5SP510-201ENST00000364697 99 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RN7SKP69-201ENST00000365390 305 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RNU4-2-201ENST00000365668 141 ntBASIC5.14□□□□□ -1.59
RAE1P78406 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAE1P78406 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 SNORD116-2-201ENST00000384274 95 ntBASIC5.14□□□□□ -1.59
RAE1P78406 RNU6-729P-201ENST00000384399 107 ntBASIC5.14□□□□□ -1.59
RAE1P78406 SNORD116-6-201ENST00000384711 96 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AL035419.1-201ENST00000397037 564 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 Z75741.2-201ENST00000417272 1167 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AL365338.1-201ENST00000422282 858 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 CACYBPP1-201ENST00000438592 684 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AL390119.1-201ENST00000440329 312 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AP000281.1-201ENST00000444036 316 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC016772.1-201ENST00000444170 1261 ntBASIC5.14□□□□□ -1.59
RAE1P78406 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.14□□□□□ -1.59
RAE1P78406 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 AL122001.1-201ENST00000457027 370 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC107015.1-201ENST00000466902 747 ntBASIC5.14□□□□□ -1.59
RAE1P78406 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RAE1P78406 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.14□□□□□ -1.59
RAE1P78406 RPL15P21-201ENST00000495592 567 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC091860.1-201ENST00000505723 432 ntBASIC5.14□□□□□ -1.59
RAE1P78406 IMPA1P1-201ENST00000510718 842 ntBASIC5.14□□□□□ -1.59
RAE1P78406 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.14□□□□□ -1.59
RAE1P78406 AC118465.1-201ENST00000513820 1271 ntBASIC5.14□□□□□ -1.59
RAE1P78406 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.14□□□□□ -1.59
RAE1P78406 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.14□□□□□ -1.59
RAE1P78406 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.14□□□□□ -1.59
RAE1P78406 MIR1273E-201ENST00000581165 102 ntBASIC5.14□□□□□ -1.59
RAE1P78406 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms