Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 USP9YP32-201ENST00000452432 430 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 RPS26P28-201ENST00000470806 348 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 NIPA2P2-201ENST00000496376 1083 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 USP9YP5-201ENST00000511770 630 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 MIR2114-201ENST00000516645 80 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.46□□□□□ -1.86
CKS1BP61024 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 AC107016.1-201ENST00000550463 337 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 NDUFB4P11-201ENST00000560510 395 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 ATP5J2P6-201ENST00000565203 266 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 AL121834.1-201ENST00000572284 509 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 ARGFXP2-201ENST00000579304 949 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.46□□□□□ -1.86
CKS1BP61024 AC020914.4-201ENST00000597690 277 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.46□□□□□ -1.86
CKS1BP61024 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.46□□□□□ -1.86
CKS1BP61024 AL359091.2-201ENST00000609303 556 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC118658.2-201ENST00000618697 459 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC103858.2-201ENST00000621471 543 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC073593.1-201ENST00000624500 411 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.46□□□□□ -1.86
CKS1BP61024 AC129915.3-201ENST00000634128 948 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 AC135068.12-201ENST00000637370 931 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 OR8A1-204ENST00000642111 1145 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.46□□□□□ -1.86
CKS1BP61024 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 AC083899.2-201ENST00000423285 1376 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.46□□□□□ -1.86
CKS1BP61024 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 AC066616.2-201ENST00000559334 1481 ntBASIC3.46□□□□□ -1.86
CKS1BP61024 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CKS1BP61024 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CKS1BP61024 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
CKS1BP61024 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC090229.1-201ENST00000590983 1609 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 RNU1-20P-201ENST00000363314 162 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 RN7SKP113-201ENST00000363891 295 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC093414.1-201ENST00000434712 514 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 RPS26P2-201ENST00000440331 348 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC019185.1-201ENST00000442718 389 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.45□□□□□ -1.86
CKS1BP61024 ANP32BP2-201ENST00000454525 545 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 RPL7P6-201ENST00000480903 738 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 SYT14P1-201ENST00000481459 721 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 RN7SKP183-201ENST00000517169 324 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC027308.1-201ENST00000517993 110 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 OR4C2P-201ENST00000530855 1064 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC015720.2-201ENST00000567709 334 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.45□□□□□ -1.86
CKS1BP61024 AC015911.5-201ENST00000587076 451 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 VN1R84P-201ENST00000593697 235 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 AC244505.7-201ENST00000599675 272 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.45□□□□□ -1.86
CKS1BP61024 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.45□□□□□ -1.86
CKS1BP61024 MIR7154-201ENST00000620673 73 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 AL672167.1-203ENST00000641299 2975 ntBASIC3.45□□□□□ -1.86
CKS1BP61024 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CKS1BP61024 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.45□□□□□ -1.86
CKS1BP61024 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.45□□□□□ -1.86
CKS1BP61024 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
CKS1BP61024 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CKS1BP61024 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKS1BP61024 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CKS1BP61024 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
CKS1BP61024 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CKS1BP61024 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.44□□□□□ -1.86
CKS1BP61024 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms