Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ELOCP6-201ENST00000429066 328 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.73□□□□□ -1.65
CDH11P55287 FAM96AP1-201ENST00000430879 482 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 MRPL50P1-201ENST00000431951 384 ntBASIC4.73□□□□□ -1.65
CDH11P55287 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 RNF2P1-201ENST00000442955 1010 ntBASIC4.73□□□□□ -1.65
CDH11P55287 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 RPL23AP23-201ENST00000452590 471 ntBASIC4.73□□□□□ -1.65
CDH11P55287 ELOCP12-201ENST00000458706 328 ntBASIC4.73□□□□□ -1.65
CDH11P55287 ATP5G1P3-201ENST00000463301 410 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 HAUS1P3-201ENST00000523909 662 ntBASIC4.73□□□□□ -1.65
CDH11P55287 HMGB1P40-201ENST00000525121 540 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 AC008126.1-201ENST00000549019 480 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH11P55287 AC025918.2-201ENST00000558683 763 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC023158.1-201ENST00000561632 1025 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 AC090330.1-201ENST00000588646 764 ntBASIC4.73□□□□□ -1.65
CDH11P55287 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 AC005252.1-201ENST00000604518 1063 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AL162431.4-201ENST00000604674 411 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AL121612.2-201ENST00000612261 482 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC104763.3-201ENST00000613765 618 ntBASIC4.73□□□□□ -1.65
CDH11P55287 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 AC037198.3-201ENST00000616754 526 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC009269.6-201ENST00000621778 588 ntBASIC4.73□□□□□ -1.65
CDH11P55287 AC105105.5-201ENST00000622635 1294 ntBASIC4.73□□□□□ -1.65
CDH11P55287 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 TMEM30CP-203ENST00000637814 1035 ntBASIC4.73□□□□□ -1.65
CDH11P55287 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH11P55287 LINC01355-201ENST00000566551 5444 ntBASIC4.73□□□□□ -1.65
CDH11P55287 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH11P55287 ZNF90P1-201ENST00000480493 1951 ntBASIC4.73□□□□□ -1.65
CDH11P55287 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH11P55287 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 AC109780.1-201ENST00000451768 1344 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH11P55287 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CDH11P55287 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 MIR133B-201ENST00000362210 119 ntBASIC4.72□□□□□ -1.65
CDH11P55287 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 RN7SKP97-201ENST00000410966 333 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH11P55287 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 PTP4A1P1-201ENST00000420539 515 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AL606495.1-201ENST00000422100 813 ntBASIC4.72□□□□□ -1.65
CDH11P55287 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 CLUHP1-201ENST00000435012 1190 ntBASIC4.72□□□□□ -1.65
CDH11P55287 CNOT7P2-201ENST00000441051 832 ntBASIC4.72□□□□□ -1.65
CDH11P55287 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 RPS11P7-201ENST00000442125 465 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AL157827.1-201ENST00000447622 132 ntBASIC4.72□□□□□ -1.65
CDH11P55287 RPS26P41-201ENST00000450370 284 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC108161.1-201ENST00000461060 402 ntBASIC4.72□□□□□ -1.65
CDH11P55287 RPL5P13-201ENST00000462840 709 ntBASIC4.72□□□□□ -1.65
CDH11P55287 RN7SL610P-201ENST00000463845 291 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC018635.1-201ENST00000468292 1030 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC079841.1-201ENST00000481228 950 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH11P55287 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH11P55287 AC093801.2-201ENST00000503966 1050 ntBASIC4.72□□□□□ -1.65
CDH11P55287 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH11P55287 AC121161.1-201ENST00000510606 652 ntBASIC4.72□□□□□ -1.65
CDH11P55287 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.72□□□□□ -1.65
CDH11P55287 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CDH11P55287 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.72□□□□□ -1.65
CDH11P55287 BNIP3P1-201ENST00000547295 580 ntBASIC4.72□□□□□ -1.65
CDH11P55287 DUX4L52-201ENST00000549363 777 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC126177.5-201ENST00000549599 178 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AL512310.9-201ENST00000553311 948 ntBASIC4.72□□□□□ -1.65
CDH11P55287 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH11P55287 AC021483.2-201ENST00000567415 758 ntBASIC4.72□□□□□ -1.65
CDH11P55287 RBM22P1-201ENST00000578589 1214 ntBASIC4.72□□□□□ -1.65
CDH11P55287 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH11P55287 AC068020.1-201ENST00000594215 661 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms