Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 RNA5SP151-201ENST00000365632 117 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.47□□□□□ -1.37
CLTCL1P53675 AC011998.1-201ENST00000433403 117 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 AC114755.5-201ENST00000447760 831 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 AL121657.1-201ENST00000327215 531 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 SNORA70C-201ENST00000384538 135 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 AL161909.1-201ENST00000397390 712 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.47□□□□□ -1.37
CLTCL1P53675 SNRPFP1-201ENST00000414761 252 ntBASIC6.47□□□□□ -1.37
CLTCL1P53675 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.47□□□□□ -1.37
CLTCL1P53675 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.47□□□□□ -1.37
CLTCL1P53675 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.47□□□□□ -1.37
CLTCL1P53675 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLTCL1P53675 AL158163.1-201ENST00000603915 1649 ntBASIC6.46□□□□□ -1.37
CLTCL1P53675 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CLTCL1P53675 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.46□□□□□ -1.38
CLTCL1P53675 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.46□□□□□ -1.38
CLTCL1P53675 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLTCL1P53675 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLTCL1P53675 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CLTCL1P53675 AC017079.1-201ENST00000333650 415 ntBASIC6.46□□□□□ -1.38
CLTCL1P53675 AC122718.1-201ENST00000439448 744 ntBASIC6.46□□□□□ -1.38
CLTCL1P53675 FAM133DP-201ENST00000464802 691 ntBASIC6.46□□□□□ -1.38
CLTCL1P53675 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.46□□□□□ -1.38
CLTCL1P53675 AC002069.2-201ENST00000603580 883 ntBASIC6.46□□□□□ -1.38
CLTCL1P53675 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLTCL1P53675 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.46□□□□□ -1.38
CLTCL1P53675 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.45□□□□□ -1.38
CLTCL1P53675 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CLTCL1P53675 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.45□□□□□ -1.38
CLTCL1P53675 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 MIR331-201ENST00000362302 94 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 RPS27AP11-201ENST00000402798 447 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 RPS12P10-201ENST00000427031 377 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.45□□□□□ -1.38
CLTCL1P53675 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.45□□□□□ -1.38
CLTCL1P53675 RPL35P6-201ENST00000490024 372 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.45□□□□□ -1.38
CLTCL1P53675 AC007224.1-201ENST00000564410 144 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 AC010503.3-201ENST00000594355 540 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 BPIFA4P-203ENST00000603168 689 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.45□□□□□ -1.38
CLTCL1P53675 AL139254.3-201ENST00000641097 674 ntBASIC6.45□□□□□ -1.38
CLTCL1P53675 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLTCL1P53675 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.45□□□□□ -1.38
CLTCL1P53675 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CLTCL1P53675 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLTCL1P53675 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLTCL1P53675 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CLTCL1P53675 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLTCL1P53675 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.44□□□□□ -1.38
CLTCL1P53675 RNA5SP388-201ENST00000362584 119 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 ATP5F1P2-201ENST00000398143 760 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 HMGN2P27-201ENST00000427352 270 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.44□□□□□ -1.38
CLTCL1P53675 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.44□□□□□ -1.38
CLTCL1P53675 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.44□□□□□ -1.38
CLTCL1P53675 AC010547.7-201ENST00000570323 333 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.44□□□□□ -1.38
CLTCL1P53675 ZYXP1-201ENST00000617638 118 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CLTCL1P53675 LARP1BP1-201ENST00000506036 1359 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 AC003985.2-201ENST00000562268 1669 ntBASIC6.44□□□□□ -1.38
CLTCL1P53675 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLTCL1P53675 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.44□□□□□ -1.38
CLTCL1P53675 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLTCL1P53675 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CLTCL1P53675 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.43□□□□□ -1.38
CLTCL1P53675 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLTCL1P53675 RNU1-94P-201ENST00000362627 173 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 RNU1-63P-201ENST00000383902 164 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 AC097374.1-203ENST00000400783 485 ntBASIC6.43□□□□□ -1.38
CLTCL1P53675 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms