Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RN7SKP265-201ENST00000516448 223 ntBASIC5.67□□□□□ -1.5
COPAP53621 RNU6-1004P-201ENST00000516584 111 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC091163.3-201ENST00000518269 1144 ntBASIC5.67□□□□□ -1.5
COPAP53621 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.67□□□□□ -1.5
COPAP53621 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 MTCYBP23-201ENST00000558717 1102 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
COPAP53621 AC009712.1-201ENST00000564938 316 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.67□□□□□ -1.5
COPAP53621 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.67□□□□□ -1.5
COPAP53621 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COPAP53621 AL157392.4-201ENST00000609756 345 ntBASIC5.67□□□□□ -1.5
COPAP53621 AC087683.2-201ENST00000611384 326 ntBASIC5.67□□□□□ -1.5
COPAP53621 AL118522.2-201ENST00000616045 615 ntBASIC5.67□□□□□ -1.5
COPAP53621 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COPAP53621 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.67□□□□□ -1.5
COPAP53621 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
COPAP53621 AC007938.2-201ENST00000604666 2634 ntBASIC5.67□□□□□ -1.5
COPAP53621 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 BTBD10P1-201ENST00000549824 1352 ntBASIC5.67□□□□□ -1.5
COPAP53621 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COPAP53621 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
COPAP53621 AC002525.1-201ENST00000624392 1622 ntBASIC5.66□□□□□ -1.5
COPAP53621 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 MAPK10-328ENST00000641553 4009 ntBASIC5.66□□□□□ -1.5
COPAP53621 AL078621.3-201ENST00000623707 2042 ntBASIC5.66□□□□□ -1.5
COPAP53621 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 ZNF29P-201ENST00000225587 168 ntBASIC5.66□□□□□ -1.5
COPAP53621 RNU1-19P-201ENST00000363306 165 ntBASIC5.66□□□□□ -1.5
COPAP53621 RNU4-2-201ENST00000365668 141 ntBASIC5.66□□□□□ -1.5
COPAP53621 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.66□□□□□ -1.5
COPAP53621 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 RNU1-136P-201ENST00000384181 164 ntBASIC5.66□□□□□ -1.5
COPAP53621 RNU6-452P-201ENST00000384406 107 ntBASIC5.66□□□□□ -1.5
COPAP53621 RNU6-178P-201ENST00000384631 104 ntBASIC5.66□□□□□ -1.5
COPAP53621 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPAP53621 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPAP53621 GPS2P1-201ENST00000411761 986 ntBASIC5.66□□□□□ -1.5
COPAP53621 NPM1P40-201ENST00000412758 733 ntBASIC5.66□□□□□ -1.5
COPAP53621 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 AC007394.1-201ENST00000421941 531 ntBASIC5.66□□□□□ -1.5
COPAP53621 OR10T1P-201ENST00000424327 947 ntBASIC5.66□□□□□ -1.5
COPAP53621 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 OR6D1P-201ENST00000436165 939 ntBASIC5.66□□□□□ -1.5
COPAP53621 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 MTCO1P53-201ENST00000441633 699 ntBASIC5.66□□□□□ -1.5
COPAP53621 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 RPL7P45-201ENST00000455851 743 ntBASIC5.66□□□□□ -1.5
COPAP53621 RPS4XP1-201ENST00000482189 787 ntBASIC5.66□□□□□ -1.5
COPAP53621 RN7SL30P-201ENST00000488416 306 ntBASIC5.66□□□□□ -1.5
COPAP53621 AC008953.1-201ENST00000497334 318 ntBASIC5.66□□□□□ -1.5
COPAP53621 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 OR8K4P-201ENST00000534608 872 ntBASIC5.66□□□□□ -1.5
COPAP53621 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 AC073387.2-201ENST00000604797 784 ntBASIC5.66□□□□□ -1.5
COPAP53621 AC011374.2-201ENST00000607135 526 ntBASIC5.66□□□□□ -1.5
COPAP53621 AL512329.2-201ENST00000607350 548 ntBASIC5.66□□□□□ -1.5
COPAP53621 AC145207.9-201ENST00000623802 325 ntBASIC5.66□□□□□ -1.5
COPAP53621 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COPAP53621 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.66□□□□□ -1.5
COPAP53621 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.66□□□□□ -1.5
COPAP53621 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.66□□□□□ -1.5
COPAP53621 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.66□□□□□ -1.5
COPAP53621 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
COPAP53621 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.66□□□□□ -1.5
COPAP53621 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COPAP53621 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 ABCC13-202ENST00000463099 3842 ntBASIC5.65□□□□□ -1.5
COPAP53621 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.65□□□□□ -1.5
COPAP53621 PWAR1-201ENST00000624188 2414 ntBASIC5.65□□□□□ -1.5
COPAP53621 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COPAP53621 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COPAP53621 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
COPAP53621 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms