Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-353P-201ENST00000364266 108 ntBASIC6.91□□□□□ -1.3
USP11P51784 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.91□□□□□ -1.3
USP11P51784 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 MIR130B-202ENST00000385018 82 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC027644.1-201ENST00000419595 298 ntBASIC6.91□□□□□ -1.3
USP11P51784 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.91□□□□□ -1.3
USP11P51784 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.91□□□□□ -1.3
USP11P51784 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 TCEA1P3-201ENST00000443005 880 ntBASIC6.91□□□□□ -1.3
USP11P51784 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 RNU7-140P-201ENST00000459546 60 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC068228.1-201ENST00000461723 211 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 RN7SL352P-201ENST00000466002 277 ntBASIC6.91□□□□□ -1.3
USP11P51784 AL121769.1-201ENST00000469473 401 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC116337.2-201ENST00000477662 156 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC092865.4-201ENST00000477936 615 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.91□□□□□ -1.3
USP11P51784 AC114728.1-201ENST00000488289 483 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.91□□□□□ -1.3
USP11P51784 ARL2BPP4-201ENST00000506854 471 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC008837.2-201ENST00000513076 418 ntBASIC6.91□□□□□ -1.3
USP11P51784 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.91□□□□□ -1.3
USP11P51784 AC092709.1-201ENST00000521355 1045 ntBASIC6.91□□□□□ -1.3
USP11P51784 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.91□□□□□ -1.3
USP11P51784 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 AP000907.4-201ENST00000604143 237 ntBASIC6.91□□□□□ -1.3
USP11P51784 AL133370.2-201ENST00000619934 439 ntBASIC6.91□□□□□ -1.3
USP11P51784 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
USP11P51784 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
USP11P51784 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 AC119674.1-202ENST00000641333 1860 ntBASIC6.91□□□□□ -1.3
USP11P51784 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
USP11P51784 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 AL354685.2-201ENST00000448218 1447 ntBASIC6.91□□□□□ -1.3
USP11P51784 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
USP11P51784 LYARP1-201ENST00000436977 1501 ntBASIC6.91□□□□□ -1.3
USP11P51784 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.9□□□□□ -1.3
USP11P51784 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 FGF7P2-201ENST00000332473 296 ntBASIC6.9□□□□□ -1.3
USP11P51784 RNU6-560P-201ENST00000364007 108 ntBASIC6.9□□□□□ -1.3
USP11P51784 RNU6-1251P-201ENST00000364502 107 ntBASIC6.9□□□□□ -1.3
USP11P51784 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.9□□□□□ -1.3
USP11P51784 MIR1277-201ENST00000408536 78 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.9□□□□□ -1.3
USP11P51784 TAF13P2-201ENST00000416876 286 ntBASIC6.9□□□□□ -1.3
USP11P51784 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 MRPS36P1-201ENST00000421291 307 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC009480.2-201ENST00000422916 432 ntBASIC6.9□□□□□ -1.3
USP11P51784 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 ETF1P3-201ENST00000430422 1160 ntBASIC6.9□□□□□ -1.3
USP11P51784 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 ATP5F1P1-201ENST00000433775 569 ntBASIC6.9□□□□□ -1.3
USP11P51784 HMGB1P31-201ENST00000437242 427 ntBASIC6.9□□□□□ -1.3
USP11P51784 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 ARAFP2-201ENST00000440565 559 ntBASIC6.9□□□□□ -1.3
USP11P51784 RPL23AP76-201ENST00000441860 458 ntBASIC6.9□□□□□ -1.3
USP11P51784 AL662791.1-201ENST00000441992 928 ntBASIC6.9□□□□□ -1.3
USP11P51784 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AL034418.1-201ENST00000448675 860 ntBASIC6.9□□□□□ -1.3
USP11P51784 MTND3P10-201ENST00000450967 341 ntBASIC6.9□□□□□ -1.3
USP11P51784 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 AP002884.1-201ENST00000479691 655 ntBASIC6.9□□□□□ -1.3
USP11P51784 RPL23AP40-201ENST00000487630 390 ntBASIC6.9□□□□□ -1.3
USP11P51784 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.9□□□□□ -1.3
USP11P51784 RNU6-506P-201ENST00000516553 94 ntBASIC6.9□□□□□ -1.3
USP11P51784 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.9□□□□□ -1.3
USP11P51784 TPM3P3-201ENST00000521343 354 ntBASIC6.9□□□□□ -1.3
USP11P51784 AP005639.2-201ENST00000527592 928 ntBASIC6.9□□□□□ -1.3
USP11P51784 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.9□□□□□ -1.3
USP11P51784 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.9□□□□□ -1.3
USP11P51784 OR11J2P-201ENST00000555298 907 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC009063.1-201ENST00000563342 702 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.9□□□□□ -1.3
USP11P51784 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AL499605.1-201ENST00000604628 403 ntBASIC6.9□□□□□ -1.3
USP11P51784 AC092354.1-201ENST00000606057 376 ntBASIC6.9□□□□□ -1.3
USP11P51784 AL159169.3-201ENST00000608871 561 ntBASIC6.9□□□□□ -1.3
USP11P51784 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
USP11P51784 AL357080.1-201ENST00000617394 239 ntBASIC6.9□□□□□ -1.3
USP11P51784 DUXAP9-208ENST00000622815 614 ntBASIC6.9□□□□□ -1.3
USP11P51784 AL157786.1-207ENST00000627771 695 ntBASIC6.9□□□□□ -1.3
USP11P51784 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.9□□□□□ -1.3
USP11P51784 AC127502.3-201ENST00000636170 1206 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms