Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AP003499.2-201ENST00000624100 483 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AC073342.3-201ENST00000624211 193 ntBASIC5.19□□□□□ -1.58
LHX1P48742 AC092376.2-201ENST00000622621 4116 ntBASIC5.19□□□□□ -1.58
LHX1P48742 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LHX1P48742 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.19□□□□□ -1.58
LHX1P48742 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LHX1P48742 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LHX1P48742 NCLP2-201ENST00000416078 1462 ntBASIC5.19□□□□□ -1.58
LHX1P48742 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 PROS2P-201ENST00000474651 1951 ntBASIC5.18□□□□□ -1.58
LHX1P48742 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 AL603750.1-201ENST00000624216 1717 ntBASIC5.18□□□□□ -1.58
LHX1P48742 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 AC017079.1-201ENST00000333650 415 ntBASIC5.18□□□□□ -1.58
LHX1P48742 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 AC019070.1-201ENST00000415008 1024 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.18□□□□□ -1.58
LHX1P48742 NRBF2P3-201ENST00000432731 865 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AL606490.7-201ENST00000433136 191 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC007563.3-201ENST00000433233 371 ntBASIC5.18□□□□□ -1.58
LHX1P48742 RPL35AP21-201ENST00000437667 333 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.18□□□□□ -1.58
LHX1P48742 AL691517.1-201ENST00000440833 1235 ntBASIC5.18□□□□□ -1.58
LHX1P48742 RPL5P25-201ENST00000441148 775 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 AC245028.2-201ENST00000458673 253 ntBASIC5.18□□□□□ -1.58
LHX1P48742 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.18□□□□□ -1.58
LHX1P48742 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.18□□□□□ -1.58
LHX1P48742 AC091544.1-201ENST00000484702 348 ntBASIC5.18□□□□□ -1.58
LHX1P48742 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.18□□□□□ -1.58
LHX1P48742 CDH12P4-201ENST00000517835 295 ntBASIC5.18□□□□□ -1.58
LHX1P48742 CDH12P3-201ENST00000517935 295 ntBASIC5.18□□□□□ -1.58
LHX1P48742 CDH12P1-201ENST00000518435 295 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.18□□□□□ -1.58
LHX1P48742 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.18□□□□□ -1.58
LHX1P48742 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 BMS1P7-201ENST00000602440 1052 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC119501.1-201ENST00000603646 475 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AL023583.1-201ENST00000607518 1143 ntBASIC5.18□□□□□ -1.58
LHX1P48742 Z95327.3-201ENST00000610385 572 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC006213.5-201ENST00000619673 288 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AL356094.1-201ENST00000624663 1212 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC019080.5-201ENST00000624891 757 ntBASIC5.18□□□□□ -1.58
LHX1P48742 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 CFTRP2-201ENST00000634304 199 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
LHX1P48742 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LHX1P48742 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.18□□□□□ -1.58
LHX1P48742 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
LHX1P48742 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LHX1P48742 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 SMG1P6-201ENST00000532337 2930 ntBASIC5.17□□□□□ -1.58
LHX1P48742 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
LHX1P48742 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 RN7SKP100-201ENST00000411258 284 ntBASIC5.17□□□□□ -1.58
LHX1P48742 RPL37P18-201ENST00000411602 243 ntBASIC5.17□□□□□ -1.58
LHX1P48742 MTCYBP7-201ENST00000419540 1134 ntBASIC5.17□□□□□ -1.58
LHX1P48742 GNG5P5-201ENST00000420444 220 ntBASIC5.17□□□□□ -1.58
LHX1P48742 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 AC017099.1-201ENST00000448261 1028 ntBASIC5.17□□□□□ -1.58
LHX1P48742 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.17□□□□□ -1.58
LHX1P48742 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 OR7H2P-201ENST00000513483 306 ntBASIC5.17□□□□□ -1.58
LHX1P48742 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
LHX1P48742 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
LHX1P48742 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.17□□□□□ -1.58
LHX1P48742 AL049839.1-201ENST00000556151 657 ntBASIC5.17□□□□□ -1.58
LHX1P48742 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.17□□□□□ -1.58
LHX1P48742 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LHX1P48742 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.17□□□□□ -1.58
LHX1P48742 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms