Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 AC073508.1-201ENST00000428866 656 ntBASIC4.68□□□□□ -1.66
SOX3P41225 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 BX323845.1-201ENST00000432417 179 ntBASIC4.68□□□□□ -1.66
SOX3P41225 VN1R54P-201ENST00000435210 1049 ntBASIC4.68□□□□□ -1.66
SOX3P41225 SDR42E1P3-201ENST00000438345 502 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AC245517.2-201ENST00000442890 346 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 MRPL35P2-201ENST00000448009 511 ntBASIC4.68□□□□□ -1.66
SOX3P41225 RN7SL244P-201ENST00000493405 297 ntBASIC4.68□□□□□ -1.66
SOX3P41225 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX3P41225 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 RNA5SP303-201ENST00000516192 130 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SOX3P41225 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 MIR4436B2-201ENST00000581415 91 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 MIR4436B1-201ENST00000583272 91 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX3P41225 AC098483.2-201ENST00000603158 454 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AL158211.2-201ENST00000607282 395 ntBASIC4.68□□□□□ -1.66
SOX3P41225 CR589904.2-201ENST00000612533 440 ntBASIC4.68□□□□□ -1.66
SOX3P41225 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 AC091905.4-201ENST00000623432 202 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AL353662.3-201ENST00000625131 237 ntBASIC4.68□□□□□ -1.66
SOX3P41225 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SOX3P41225 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX3P41225 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.68□□□□□ -1.66
SOX3P41225 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX3P41225 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX3P41225 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
SOX3P41225 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 AC009501.3-201ENST00000605001 1352 ntBASIC4.67□□□□□ -1.66
SOX3P41225 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 PCAT14-202ENST00000627127 3935 ntBASIC4.67□□□□□ -1.66
SOX3P41225 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX3P41225 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 AL672167.2-201ENST00000377164 879 ntBASIC4.67□□□□□ -1.66
SOX3P41225 SNORA2.3-201ENST00000383920 135 ntBASIC4.67□□□□□ -1.66
SOX3P41225 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SOX3P41225 MIR550A3-201ENST00000390735 95 ntBASIC4.67□□□□□ -1.66
SOX3P41225 EI24P3-201ENST00000399046 1062 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AL359643.1-201ENST00000404109 423 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 AC013429.2-201ENST00000418798 781 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 AC009238.2-201ENST00000431026 355 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 TRY2P-201ENST00000448860 689 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AL645937.3-201ENST00000453647 936 ntBASIC4.67□□□□□ -1.66
SOX3P41225 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC091180.1-201ENST00000462104 372 ntBASIC4.67□□□□□ -1.66
SOX3P41225 CABYRP1-201ENST00000465493 1045 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX3P41225 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.67□□□□□ -1.66
SOX3P41225 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 OR5AZ1P-201ENST00000527448 943 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 NMNAT1P1-201ENST00000554095 876 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX3P41225 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.67□□□□□ -1.66
SOX3P41225 AL450270.1-201ENST00000606160 391 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC005021.1-201ENST00000608730 355 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC084824.5-201ENST00000612009 413 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AC253576.2-201ENST00000618815 580 ntBASIC4.67□□□□□ -1.66
SOX3P41225 AP006248.3-201ENST00000623580 594 ntBASIC4.67□□□□□ -1.66
SOX3P41225 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 AC110792.3-201ENST00000595906 1614 ntBASIC4.67□□□□□ -1.66
SOX3P41225 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SOX3P41225 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.67□□□□□ -1.66
SOX3P41225 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SOX3P41225 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SOX3P41225 CASC19-221ENST00000641309 1382 ntBASIC4.66□□□□□ -1.66
SOX3P41225 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.66□□□□□ -1.66
SOX3P41225 AC133552.1-201ENST00000569988 4007 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms