Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC021193.1-201ENST00000511607 420 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 NPM1P41-201ENST00000512920 831 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN4AP35499 AP001160.4-201ENST00000596971 382 ntBASIC5.57□□□□□ -1.52
SCN4AP35499 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN4AP35499 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN4AP35499 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN4AP35499 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN4AP35499 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SCN4AP35499 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SCN4AP35499 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 RNU1-130P-201ENST00000363930 160 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 SNORA11.1-201ENST00000408133 129 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 RPS3AP25-201ENST00000411660 793 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 RPL21P89-201ENST00000444021 467 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN4AP35499 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN4AP35499 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.56□□□□□ -1.52
SCN4AP35499 MIR4472-2-201ENST00000582069 67 ntBASIC5.56□□□□□ -1.52
SCN4AP35499 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SCN4AP35499 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.56□□□□□ -1.52
SCN4AP35499 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.56□□□□□ -1.52
SCN4AP35499 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SCN4AP35499 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN4AP35499 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 VN1R37P-201ENST00000419096 748 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SCN4AP35499 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SCN4AP35499 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 AL451139.1-201ENST00000434718 346 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 SCARNA10-201ENST00000459255 330 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 RN7SL517P-201ENST00000462240 305 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 AP003730.1-201ENST00000524605 285 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN4AP35499 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.55□□□□□ -1.52
SCN4AP35499 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 AC022884.2-201ENST00000578535 580 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 MIR6075-201ENST00000620782 95 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN4AP35499 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.55□□□□□ -1.52
SCN4AP35499 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 AC009643.2-201ENST00000603543 1448 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.55□□□□□ -1.52
SCN4AP35499 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SCN4AP35499 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 AL360270.2-201ENST00000562952 5985 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 RNA5SP283-201ENST00000365604 119 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AL672167.2-201ENST00000377164 879 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 AL607077.1-201ENST00000401718 499 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 RNU6-628P-201ENST00000410675 107 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 TMBIM7P-201ENST00000418074 855 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 PRPF38AP1-201ENST00000451976 933 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 DSTNP2-201ENST00000504533 515 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.55□□□□□ -1.52
SCN4AP35499 AC018695.5-201ENST00000605872 315 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 AC039056.2-201ENST00000622261 511 ntBASIC5.55□□□□□ -1.52
SCN4AP35499 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
SCN4AP35499 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SCN4AP35499 AC135352.1-201ENST00000506173 1418 ntBASIC5.54□□□□□ -1.52
SCN4AP35499 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SCN4AP35499 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SCN4AP35499 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.54□□□□□ -1.52
SCN4AP35499 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SCN4AP35499 MAPK10-328ENST00000641553 4009 ntBASIC5.54□□□□□ -1.52
SCN4AP35499 SNORA62.3-201ENST00000365110 153 ntBASIC5.54□□□□□ -1.52
SCN4AP35499 OR1L6-202ENST00000373684 1044 ntBASIC5.54□□□□□ -1.52
SCN4AP35499 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.54□□□□□ -1.52
SCN4AP35499 AL359265.1-201ENST00000440296 795 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms