Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC091905.4-201ENST00000623432 202 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC008993.2-201ENST00000631744 806 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AL356118.1-201ENST00000635272 1078 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AC006927.4-201ENST00000639187 543 ntBASIC5.7□□□□□ -1.5
CIITAP33076 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 OR9K1P-202ENST00000641111 3217 ntBASIC5.7□□□□□ -1.5
CIITAP33076 AL627171.1-201ENST00000618845 1308 ntBASIC5.7□□□□□ -1.5
CIITAP33076 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.7□□□□□ -1.5
CIITAP33076 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CIITAP33076 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CIITAP33076 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 RNA5SP187-201ENST00000384400 119 ntBASIC5.69□□□□□ -1.5
CIITAP33076 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CIITAP33076 Z97832.1-201ENST00000402490 328 ntBASIC5.69□□□□□ -1.5
CIITAP33076 RPL10P10-201ENST00000403509 664 ntBASIC5.69□□□□□ -1.5
CIITAP33076 RN7SKP125-201ENST00000410481 302 ntBASIC5.69□□□□□ -1.5
CIITAP33076 PCNPP4-201ENST00000414817 517 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 RPS26P13-201ENST00000419030 330 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 AL121882.1-201ENST00000422893 417 ntBASIC5.69□□□□□ -1.5
CIITAP33076 MTCO2P1-201ENST00000424648 477 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.69□□□□□ -1.5
CIITAP33076 MTCO1P45-201ENST00000431457 267 ntBASIC5.69□□□□□ -1.5
CIITAP33076 MRPL50P1-201ENST00000431951 384 ntBASIC5.69□□□□□ -1.5
CIITAP33076 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 ELOCP3-201ENST00000439303 348 ntBASIC5.69□□□□□ -1.5
CIITAP33076 TXNP5-201ENST00000441043 315 ntBASIC5.69□□□□□ -1.5
CIITAP33076 OTX2P1-201ENST00000450956 354 ntBASIC5.69□□□□□ -1.5
CIITAP33076 RPS17P2-201ENST00000461663 408 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC091180.1-201ENST00000462104 372 ntBASIC5.69□□□□□ -1.5
CIITAP33076 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.69□□□□□ -1.5
CIITAP33076 AC231760.1-201ENST00000498002 260 ntBASIC5.69□□□□□ -1.5
CIITAP33076 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 AC008147.3-201ENST00000548666 354 ntBASIC5.69□□□□□ -1.5
CIITAP33076 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 AL121594.4-201ENST00000556211 1196 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.69□□□□□ -1.5
CIITAP33076 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 AL133247.2-201ENST00000603236 482 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 AC025016.1-201ENST00000616746 682 ntBASIC5.69□□□□□ -1.5
CIITAP33076 RMST_5.1-201ENST00000618704 126 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 AC109809.1-201ENST00000619665 545 ntBASIC5.69□□□□□ -1.5
CIITAP33076 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CIITAP33076 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 MUC2-202ENST00000613187 4845 ntBASIC5.69□□□□□ -1.5
CIITAP33076 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
CIITAP33076 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CIITAP33076 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.69□□□□□ -1.5
CIITAP33076 MTCO1P15-201ENST00000529569 1526 ntBASIC5.69□□□□□ -1.5
CIITAP33076 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CIITAP33076 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.68□□□□□ -1.5
CIITAP33076 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CIITAP33076 MIR122-201ENST00000385044 85 ntBASIC5.68□□□□□ -1.5
CIITAP33076 LRRC37BP1-201ENST00000398851 714 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AL645733.1-201ENST00000402250 217 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AP002530.1-201ENST00000405705 684 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CIITAP33076 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 AL512637.2-201ENST00000431287 1256 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 RPL7P11-201ENST00000437586 658 ntBASIC5.68□□□□□ -1.5
CIITAP33076 RPL5P25-201ENST00000441148 775 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 CABYRP1-201ENST00000465493 1045 ntBASIC5.68□□□□□ -1.5
CIITAP33076 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 AC140172.1-201ENST00000502928 141 ntBASIC5.68□□□□□ -1.5
CIITAP33076 MRPS33P2-201ENST00000507850 322 ntBASIC5.68□□□□□ -1.5
CIITAP33076 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.68□□□□□ -1.5
CIITAP33076 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CIITAP33076 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.68□□□□□ -1.5
CIITAP33076 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.68□□□□□ -1.5
CIITAP33076 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.68□□□□□ -1.5
CIITAP33076 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.68□□□□□ -1.5
CIITAP33076 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CIITAP33076 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms