Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 AP002370.1-201ENST00000528055 1602 ntBASIC5.47□□□□□ -1.53
CD40P25942 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 CR383658.2-201ENST00000547576 1525 ntBASIC5.47□□□□□ -1.53
CD40P25942 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC5.47□□□□□ -1.53
CD40P25942 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CD40P25942 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CD40P25942 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
CD40P25942 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.46□□□□□ -1.53
CD40P25942 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.46□□□□□ -1.53
CD40P25942 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
CD40P25942 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CD40P25942 AC104966.1-201ENST00000467010 1464 ntBASIC5.46□□□□□ -1.53
CD40P25942 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.46□□□□□ -1.53
CD40P25942 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 STAG3L4-201ENST00000352103 530 ntBASIC5.46□□□□□ -1.54
CD40P25942 Y_RNA.3-201ENST00000362331 103 ntBASIC5.46□□□□□ -1.54
CD40P25942 RNA5SP346-201ENST00000363541 121 ntBASIC5.46□□□□□ -1.54
CD40P25942 RNA5SP433-201ENST00000364491 114 ntBASIC5.46□□□□□ -1.54
CD40P25942 RNA5SP88-201ENST00000365560 109 ntBASIC5.46□□□□□ -1.54
CD40P25942 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 RNY3P10-201ENST00000384764 102 ntBASIC5.46□□□□□ -1.54
CD40P25942 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CD40P25942 AC007066.1-201ENST00000392902 381 ntBASIC5.46□□□□□ -1.54
CD40P25942 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.46□□□□□ -1.54
CD40P25942 MTCYBP38-201ENST00000417160 1123 ntBASIC5.46□□□□□ -1.54
CD40P25942 RBMY2KP-201ENST00000418221 992 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL133325.1-201ENST00000421090 382 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC004448.2-201ENST00000422360 586 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 AC069154.1-201ENST00000432914 542 ntBASIC5.46□□□□□ -1.54
CD40P25942 FABP5P2-201ENST00000439042 408 ntBASIC5.46□□□□□ -1.54
CD40P25942 ACTR3P2-201ENST00000439585 1257 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 EPS15P1-201ENST00000448836 336 ntBASIC5.46□□□□□ -1.54
CD40P25942 RPL18AP17-201ENST00000455326 198 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 SRRM1P2-201ENST00000464531 1192 ntBASIC5.46□□□□□ -1.54
CD40P25942 RPL30P9-201ENST00000465586 330 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC090013.1-201ENST00000485147 480 ntBASIC5.46□□□□□ -1.54
CD40P25942 RPL7P41-201ENST00000485823 957 ntBASIC5.46□□□□□ -1.54
CD40P25942 OR4G11P-201ENST00000492842 939 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 AC005363.1-201ENST00000530779 351 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL139174.1-201ENST00000531489 886 ntBASIC5.46□□□□□ -1.54
CD40P25942 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 AC137768.1-201ENST00000549998 553 ntBASIC5.46□□□□□ -1.54
CD40P25942 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.46□□□□□ -1.54
CD40P25942 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 AC107982.3-201ENST00000584957 985 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC090236.2-201ENST00000587933 1101 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC079315.1-201ENST00000602952 623 ntBASIC5.46□□□□□ -1.54
CD40P25942 RPL12P48-201ENST00000605620 304 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC068276.1-201ENST00000605793 379 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL008723.3-201ENST00000608926 449 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 MIR6778-201ENST00000617912 73 ntBASIC5.46□□□□□ -1.54
CD40P25942 CR392039.4-201ENST00000624968 501 ntBASIC5.46□□□□□ -1.54
CD40P25942 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 AC073869.7-201ENST00000640874 297 ntBASIC5.46□□□□□ -1.54
CD40P25942 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 AC107980.1-201ENST00000558671 3355 ntBASIC5.46□□□□□ -1.54
CD40P25942 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.46□□□□□ -1.54
CD40P25942 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CD40P25942 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 AC016251.2-201ENST00000623393 3089 ntBASIC5.46□□□□□ -1.54
CD40P25942 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 AC105235.1-201ENST00000623208 1816 ntBASIC5.46□□□□□ -1.54
CD40P25942 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.46□□□□□ -1.54
CD40P25942 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CD40P25942 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CD40P25942 AL603750.1-201ENST00000624216 1717 ntBASIC5.45□□□□□ -1.54
CD40P25942 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CD40P25942 AL391261.1-201ENST00000555712 1479 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms