Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.63□□□□□ -1.51
BDNFP23560 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BDNFP23560 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.63□□□□□ -1.51
BDNFP23560 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
BDNFP23560 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
BDNFP23560 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.63□□□□□ -1.51
BDNFP23560 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.63□□□□□ -1.51
BDNFP23560 HSPA8P19-201ENST00000505359 1517 ntBASIC5.63□□□□□ -1.51
BDNFP23560 ABCC13-202ENST00000463099 3842 ntBASIC5.63□□□□□ -1.51
BDNFP23560 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 MTND5P11-201ENST00000511037 1812 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.62□□□□□ -1.51
BDNFP23560 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 ARL2BPP3-201ENST00000421226 480 ntBASIC5.62□□□□□ -1.51
BDNFP23560 RPL30P3-201ENST00000424262 333 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.62□□□□□ -1.51
BDNFP23560 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.62□□□□□ -1.51
BDNFP23560 BRWD1P3-201ENST00000428816 390 ntBASIC5.62□□□□□ -1.51
BDNFP23560 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AL359265.1-201ENST00000440296 795 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 AC069540.1-201ENST00000446320 988 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AL500527.1-201ENST00000448532 255 ntBASIC5.62□□□□□ -1.51
BDNFP23560 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 COX6B1P6-201ENST00000522347 255 ntBASIC5.62□□□□□ -1.51
BDNFP23560 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 OR4A43P-201ENST00000532938 908 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.62□□□□□ -1.51
BDNFP23560 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.62□□□□□ -1.51
BDNFP23560 AC063949.1-201ENST00000552900 865 ntBASIC5.62□□□□□ -1.51
BDNFP23560 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 MIR3691-201ENST00000578066 90 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.62□□□□□ -1.51
BDNFP23560 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.62□□□□□ -1.51
BDNFP23560 RNA5SP439-201ENST00000617595 124 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AC090527.3-201ENST00000619041 548 ntBASIC5.62□□□□□ -1.51
BDNFP23560 AP003400.3-201ENST00000624904 346 ntBASIC5.62□□□□□ -1.51
BDNFP23560 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BDNFP23560 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BDNFP23560 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.62□□□□□ -1.51
BDNFP23560 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BDNFP23560 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BDNFP23560 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BDNFP23560 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
BDNFP23560 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BDNFP23560 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BDNFP23560 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AL049737.1-201ENST00000413920 1403 ntBASIC5.61□□□□□ -1.51
BDNFP23560 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.61□□□□□ -1.51
BDNFP23560 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 AL139811.1-201ENST00000424779 2299 ntBASIC5.61□□□□□ -1.51
BDNFP23560 DYNLL1P7-201ENST00000429273 258 ntBASIC5.61□□□□□ -1.51
BDNFP23560 BX276092.6-201ENST00000430476 250 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AC138761.5-201ENST00000433967 325 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 PTMAP6-201ENST00000439110 327 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
BDNFP23560 AL389915.2-201ENST00000454576 441 ntBASIC5.61□□□□□ -1.51
BDNFP23560 BX276092.8-201ENST00000455722 250 ntBASIC5.61□□□□□ -1.51
BDNFP23560 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
BDNFP23560 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.61□□□□□ -1.51
BDNFP23560 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.61□□□□□ -1.51
BDNFP23560 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.61□□□□□ -1.51
BDNFP23560 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.61□□□□□ -1.51
BDNFP23560 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.61□□□□□ -1.51
BDNFP23560 AC044860.2-201ENST00000561005 179 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.61□□□□□ -1.51
BDNFP23560 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.61□□□□□ -1.51
BDNFP23560 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.61□□□□□ -1.51
BDNFP23560 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 ABI1P1-201ENST00000603375 1120 ntBASIC5.61□□□□□ -1.51
BDNFP23560 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.61□□□□□ -1.51
BDNFP23560 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.61□□□□□ -1.51
BDNFP23560 AL021707.7-201ENST00000607991 416 ntBASIC5.61□□□□□ -1.51
BDNFP23560 AL121612.2-201ENST00000612261 482 ntBASIC5.61□□□□□ -1.51
BDNFP23560 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms