Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC007448.1-201ENST00000582714 234 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
ERCC3P19447 AP001267.4-201ENST00000602598 545 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 BX323046.1-201ENST00000610145 535 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AC005332.6-201ENST00000613178 446 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC074140.1-201ENST00000621617 208 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 AC116563.2-201ENST00000624751 535 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AL132640.3-201ENST00000630473 177 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AC073488.3-201ENST00000631611 778 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 AC011477.1-204ENST00000623416 1325 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AC097063.1-201ENST00000426714 1797 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 AP005432.1-201ENST00000580891 3485 ntBASIC7.17□□□□□ -1.26
ERCC3P19447 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.17□□□□□ -1.26
ERCC3P19447 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ERCC3P19447 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.17□□□□□ -1.26
ERCC3P19447 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 AP002370.1-201ENST00000528055 1602 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC092724.1-201ENST00000624623 3397 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
ERCC3P19447 RNU6-492P-201ENST00000363035 104 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 SNORD116-4-201ENST00000384733 96 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AL360271.1-201ENST00000395679 510 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 AL096800.1-201ENST00000405326 893 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 DLGAP5P1-201ENST00000430307 464 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 KCTD10P1-201ENST00000434203 625 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 OR3D1P-201ENST00000438288 955 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 ZNF619P1-201ENST00000446539 752 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 MORF4-201ENST00000447135 971 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 NDUFA5P7-201ENST00000452914 242 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 NXT1P1-201ENST00000458481 316 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 ACA64.1-201ENST00000459171 127 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 HSPE1P23-201ENST00000509838 286 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 RNA5SP434-201ENST00000516647 121 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 Y_RNA.710-201ENST00000516975 110 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.16□□□□□ -1.26
ERCC3P19447 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 SMARCE1P4-201ENST00000523647 241 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
ERCC3P19447 AC007115.1-201ENST00000546853 234 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 BLZF2P-201ENST00000553776 1130 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.16□□□□□ -1.26
ERCC3P19447 AP001981.2-201ENST00000603241 418 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AL139286.2-201ENST00000606838 396 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC108673.3-201ENST00000609183 335 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AL158063.1-201ENST00000615349 536 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC073348.1-201ENST00000623002 331 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 AC079753.1-201ENST00000623243 3868 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
ERCC3P19447 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.16□□□□□ -1.26
ERCC3P19447 AL592429.1-201ENST00000403909 1473 ntBASIC7.16□□□□□ -1.26
ERCC3P19447 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
ERCC3P19447 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
ERCC3P19447 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC3P19447 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms