Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC108751.2-201ENST00000469993 231 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 CDH12P4-201ENST00000517835 295 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 CDH12P3-201ENST00000517935 295 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.84□□□□□ -1.63
XRCC1P18887 CDH12P1-201ENST00000518435 295 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.84□□□□□ -1.63
XRCC1P18887 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
XRCC1P18887 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
XRCC1P18887 MIR4700-201ENST00000578311 74 ntBASIC4.84□□□□□ -1.63
XRCC1P18887 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.84□□□□□ -1.63
XRCC1P18887 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XRCC1P18887 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
XRCC1P18887 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.84□□□□□ -1.64
XRCC1P18887 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
XRCC1P18887 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
XRCC1P18887 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.64
XRCC1P18887 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
XRCC1P18887 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 RNU4-23P-201ENST00000362839 140 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 MIR585-201ENST00000384887 94 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
XRCC1P18887 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC233289.1-201ENST00000403700 508 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.83□□□□□ -1.64
XRCC1P18887 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC007559.1-201ENST00000428736 355 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 USP9YP9-201ENST00000429406 715 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 AL356390.1-201ENST00000455684 397 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC098583.1-201ENST00000480875 255 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.83□□□□□ -1.64
XRCC1P18887 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 AP001804.2-201ENST00000533932 910 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 MIR4737-201ENST00000583979 81 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC009303.3-201ENST00000591103 736 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 IMMP1LP1-201ENST00000605170 488 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC100827.5-201ENST00000615883 426 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.83□□□□□ -1.64
XRCC1P18887 AC006840.1-201ENST00000623069 542 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 AC099654.2-201ENST00000433031 1980 ntBASIC4.83□□□□□ -1.64
XRCC1P18887 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
XRCC1P18887 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
XRCC1P18887 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
XRCC1P18887 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
XRCC1P18887 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
XRCC1P18887 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
XRCC1P18887 SDAD1P1-202ENST00000524156 2051 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
XRCC1P18887 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
XRCC1P18887 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 BMS1P3-201ENST00000372011 932 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
XRCC1P18887 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
XRCC1P18887 AL592291.1-201ENST00000403830 352 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.82□□□□□ -1.64
XRCC1P18887 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.82□□□□□ -1.64
XRCC1P18887 RCC2P2-201ENST00000422174 918 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.82□□□□□ -1.64
XRCC1P18887 MTCO1P51-201ENST00000427672 1060 ntBASIC4.82□□□□□ -1.64
XRCC1P18887 AL360081.1-201ENST00000428299 555 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms