Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.02□□□□□ -1.29
LIG1P18858 OR4G1P-201ENST00000588632 938 ntBASIC7.02□□□□□ -1.29
LIG1P18858 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.02□□□□□ -1.29
LIG1P18858 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.02□□□□□ -1.29
LIG1P18858 AL356055.1-201ENST00000602528 446 ntBASIC7.02□□□□□ -1.29
LIG1P18858 MTCO2P22-201ENST00000603246 681 ntBASIC7.02□□□□□ -1.29
LIG1P18858 NDUFA8P1-201ENST00000605525 367 ntBASIC7.02□□□□□ -1.29
LIG1P18858 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.02□□□□□ -1.29
LIG1P18858 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.02□□□□□ -1.29
LIG1P18858 AL159169.2-201ENST00000610061 1269 ntBASIC7.02□□□□□ -1.29
LIG1P18858 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.02□□□□□ -1.29
LIG1P18858 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.02□□□□□ -1.29
LIG1P18858 AC127502.3-201ENST00000636170 1206 ntBASIC7.02□□□□□ -1.29
LIG1P18858 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
LIG1P18858 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.02□□□□□ -1.29
LIG1P18858 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LIG1P18858 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.02□□□□□ -1.29
LIG1P18858 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
LIG1P18858 AC024587.1-201ENST00000505925 2157 ntBASIC7.02□□□□□ -1.29
LIG1P18858 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
LIG1P18858 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LIG1P18858 AC011477.1-204ENST00000623416 1325 ntBASIC7.01□□□□□ -1.29
LIG1P18858 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 AC092447.7-201ENST00000422212 1621 ntBASIC7.01□□□□□ -1.29
LIG1P18858 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 AC024651.2-201ENST00000562480 2098 ntBASIC7.01□□□□□ -1.29
LIG1P18858 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
LIG1P18858 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 AL157702.1-201ENST00000398764 426 ntBASIC7.01□□□□□ -1.29
LIG1P18858 SNORA77.2-201ENST00000408571 112 ntBASIC7.01□□□□□ -1.29
LIG1P18858 RN7SKP121-201ENST00000410842 305 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 RPL21P50-201ENST00000417698 477 ntBASIC7.01□□□□□ -1.29
LIG1P18858 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 IPMKP1-201ENST00000425988 855 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 MED14P1-201ENST00000430517 648 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AL035458.1-201ENST00000433096 585 ntBASIC7.01□□□□□ -1.29
LIG1P18858 GAPDHP59-201ENST00000435908 267 ntBASIC7.01□□□□□ -1.29
LIG1P18858 UBE2V1P7-201ENST00000446395 340 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.01□□□□□ -1.29
LIG1P18858 FGF7P6-202ENST00000451282 293 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC118758.1-202ENST00000454719 225 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.01□□□□□ -1.29
LIG1P18858 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 MTCO3P38-201ENST00000468910 766 ntBASIC7.01□□□□□ -1.29
LIG1P18858 RN7SL643P-201ENST00000471845 291 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC109486.1-201ENST00000486833 374 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC138853.1-201ENST00000503549 823 ntBASIC7.01□□□□□ -1.29
LIG1P18858 SNX18P24-201ENST00000505249 671 ntBASIC7.01□□□□□ -1.29
LIG1P18858 RPL37P25-201ENST00000507308 276 ntBASIC7.01□□□□□ -1.29
LIG1P18858 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 SNORA74.1-201ENST00000516320 180 ntBASIC7.01□□□□□ -1.29
LIG1P18858 RNU6-528P-201ENST00000516926 100 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 ROCK1P1-201ENST00000573767 549 ntBASIC7.01□□□□□ -1.29
LIG1P18858 MIR5708-201ENST00000579723 85 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 AC090186.1-201ENST00000605991 572 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.01□□□□□ -1.29
LIG1P18858 AL135999.3-201ENST00000610501 812 ntBASIC7.01□□□□□ -1.29
LIG1P18858 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 MIR6811-201ENST00000620409 58 ntBASIC7.01□□□□□ -1.29
LIG1P18858 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 AC022509.4-201ENST00000621404 572 ntBASIC7.01□□□□□ -1.29
LIG1P18858 MIR6806-201ENST00000622141 64 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC015799.1-201ENST00000622996 3122 ntBASIC7.01□□□□□ -1.29
LIG1P18858 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
LIG1P18858 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.01□□□□□ -1.29
LIG1P18858 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIG1P18858 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
LIG1P18858 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7□□□□□ -1.29
LIG1P18858 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
LIG1P18858 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms