Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNA5SP317-201ENST00000410176 116 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 RNA5SP311-201ENST00000411290 116 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 PHBP16-201ENST00000446318 950 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AC104651.2-201ENST00000447549 528 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 RPL21P129-201ENST00000491732 478 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 RNA5SP315-201ENST00000516340 116 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 RNA5SP312-201ENST00000517068 116 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.16□□□□□ -1.58
COL11A1P12107 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 AC090286.3-201ENST00000573133 187 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 SNX18P1Y-201ENST00000616231 511 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.16□□□□□ -1.58
COL11A1P12107 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL11A1P12107 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 TDGF1P1-201ENST00000445734 527 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AL157385.1-201ENST00000446973 268 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.16□□□□□ -1.58
COL11A1P12107 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.16□□□□□ -1.58
COL11A1P12107 AC091167.1-201ENST00000492017 396 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 NPM1P28-201ENST00000492269 840 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 RNA5SP143-201ENST00000516936 115 ntBASIC5.16□□□□□ -1.58
COL11A1P12107 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL11A1P12107 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.16□□□□□ -1.58
COL11A1P12107 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.16□□□□□ -1.58
COL11A1P12107 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL11A1P12107 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL11A1P12107 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL11A1P12107 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
COL11A1P12107 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.15□□□□□ -1.58
COL11A1P12107 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
COL11A1P12107 UBBP2-201ENST00000376781 231 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 RPL21P65-201ENST00000406094 466 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 OR8G2P-201ENST00000412796 908 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 SNRPFP1-201ENST00000414761 252 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.15□□□□□ -1.59
COL11A1P12107 RPS12P10-201ENST00000427031 377 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AC011998.1-201ENST00000433403 117 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 NDUFA5P1-201ENST00000433858 341 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.15□□□□□ -1.59
COL11A1P12107 CDC27P1-201ENST00000445384 715 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.15□□□□□ -1.59
COL11A1P12107 SNORA31.9-201ENST00000516429 84 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.15□□□□□ -1.59
COL11A1P12107 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.15□□□□□ -1.59
COL11A1P12107 AL445567.2-201ENST00000618935 498 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 AL023881.1-201ENST00000621088 301 ntBASIC5.15□□□□□ -1.59
COL11A1P12107 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.15□□□□□ -1.59
COL11A1P12107 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
COL11A1P12107 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
COL11A1P12107 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL11A1P12107 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
COL11A1P12107 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL11A1P12107 SDHCP2-201ENST00000398565 501 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.14□□□□□ -1.59
COL11A1P12107 AL139095.3-201ENST00000419672 1203 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 CYP4F29P-201ENST00000420685 446 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.14□□□□□ -1.59
COL11A1P12107 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 AL935212.3-201ENST00000450729 284 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.14□□□□□ -1.59
COL11A1P12107 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.14□□□□□ -1.59
COL11A1P12107 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.14□□□□□ -1.59
COL11A1P12107 AC105233.3-201ENST00000531125 744 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 AP001804.2-201ENST00000533932 910 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.14□□□□□ -1.59
COL11A1P12107 AC007224.1-201ENST00000564410 144 ntBASIC5.14□□□□□ -1.59
COL11A1P12107 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 403.1 ms