Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RPL7P11-201ENST00000437586 658 ntBASIC5.13□□□□□ -1.59
KRT3P12035 NPM1P33-201ENST00000438918 872 ntBASIC5.13□□□□□ -1.59
KRT3P12035 CEACAMP7-201ENST00000444105 496 ntBASIC5.13□□□□□ -1.59
KRT3P12035 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 HSPE1P22-201ENST00000456856 327 ntBASIC5.13□□□□□ -1.59
KRT3P12035 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT3P12035 AP000942.1-201ENST00000463969 747 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AC105918.1-201ENST00000474399 838 ntBASIC5.13□□□□□ -1.59
KRT3P12035 NPM1P29-201ENST00000483112 803 ntBASIC5.13□□□□□ -1.59
KRT3P12035 RPS4XP14-201ENST00000493072 781 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT3P12035 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.13□□□□□ -1.59
KRT3P12035 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT3P12035 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRT3P12035 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 SNORA74C-1-201ENST00000580726 201 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.13□□□□□ -1.59
KRT3P12035 AC087763.1-201ENST00000603391 286 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AC010424.2-201ENST00000607594 443 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AC012467.1-201ENST00000607740 256 ntBASIC5.13□□□□□ -1.59
KRT3P12035 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KRT3P12035 AC016769.4-201ENST00000616893 535 ntBASIC5.13□□□□□ -1.59
KRT3P12035 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT3P12035 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.13□□□□□ -1.59
KRT3P12035 AC015722.2-201ENST00000622210 551 ntBASIC5.13□□□□□ -1.59
KRT3P12035 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.13□□□□□ -1.59
KRT3P12035 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KRT3P12035 AC107068.1-201ENST00000563286 4218 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC087565.3-202ENST00000642085 1603 ntBASIC5.12□□□□□ -1.59
KRT3P12035 OR10AB1P-202ENST00000641219 1686 ntBASIC5.12□□□□□ -1.59
KRT3P12035 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT3P12035 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
KRT3P12035 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
KRT3P12035 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT3P12035 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KRT3P12035 RNU6-152P-201ENST00000384037 107 ntBASIC5.12□□□□□ -1.59
KRT3P12035 MIR323B-201ENST00000385269 82 ntBASIC5.12□□□□□ -1.59
KRT3P12035 HMGB3P7-201ENST00000400214 611 ntBASIC5.12□□□□□ -1.59
KRT3P12035 DPPA2P3-201ENST00000411853 655 ntBASIC5.12□□□□□ -1.59
KRT3P12035 GTF2IP5-201ENST00000414608 731 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT3P12035 RNF19BPX-201ENST00000426224 625 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AL627308.1-201ENST00000435693 821 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AL606490.8-201ENST00000441624 319 ntBASIC5.12□□□□□ -1.59
KRT3P12035 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT3P12035 RPL23AP56-201ENST00000460778 453 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC104629.2-201ENST00000468627 598 ntBASIC5.12□□□□□ -1.59
KRT3P12035 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT3P12035 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.12□□□□□ -1.59
KRT3P12035 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
KRT3P12035 RNA5SP303-201ENST00000516192 130 ntBASIC5.12□□□□□ -1.59
KRT3P12035 RNA5SP392-201ENST00000516905 112 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC104997.1-201ENST00000519761 717 ntBASIC5.12□□□□□ -1.59
KRT3P12035 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT3P12035 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT3P12035 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.12□□□□□ -1.59
KRT3P12035 OR7E10P-201ENST00000526420 991 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.12□□□□□ -1.59
KRT3P12035 AL049839.1-201ENST00000556151 657 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT3P12035 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.12□□□□□ -1.59
KRT3P12035 KATNBL1P1-201ENST00000605192 748 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC012213.4-201ENST00000606457 354 ntBASIC5.12□□□□□ -1.59
KRT3P12035 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT3P12035 AL022401.1-201ENST00000619498 108 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC012414.7-202ENST00000622705 1090 ntBASIC5.12□□□□□ -1.59
KRT3P12035 AC091905.4-201ENST00000623432 202 ntBASIC5.12□□□□□ -1.59
KRT3P12035 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KRT3P12035 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.12□□□□□ -1.59
KRT3P12035 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
KRT3P12035 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT3P12035 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
KRT3P12035 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT3P12035 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KRT3P12035 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT3P12035 RN7SKP95-201ENST00000362860 303 ntBASIC5.11□□□□□ -1.59
KRT3P12035 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
KRT3P12035 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KRT3P12035 CHEK2P3-201ENST00000416118 248 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.11□□□□□ -1.59
KRT3P12035 RGS17P1-201ENST00000423358 553 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT3P12035 MTCO1P57-201ENST00000432182 261 ntBASIC5.11□□□□□ -1.59
KRT3P12035 TRIM60P13-201ENST00000432350 1283 ntBASIC5.11□□□□□ -1.59
KRT3P12035 PRPF38AP2-201ENST00000438179 851 ntBASIC5.11□□□□□ -1.59
KRT3P12035 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT3P12035 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
KRT3P12035 NPM1P39-201ENST00000449818 867 ntBASIC5.11□□□□□ -1.59
KRT3P12035 MORF4L1P4-201ENST00000450245 976 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.11□□□□□ -1.59
KRT3P12035 snoU13.20-201ENST00000459180 104 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AC026348.1-201ENST00000462549 1053 ntBASIC5.11□□□□□ -1.59
KRT3P12035 RN7SL558P-201ENST00000497468 299 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AK4P6-201ENST00000505168 528 ntBASIC5.11□□□□□ -1.59
KRT3P12035 RNU6-709P-201ENST00000517257 104 ntBASIC5.11□□□□□ -1.59
KRT3P12035 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.11□□□□□ -1.59
KRT3P12035 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms