Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.87□□□□□ -1.15
TOP2AP11388 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC7.87□□□□□ -1.15
TOP2AP11388 MIR8059-201ENST00000620427 81 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 AL445363.3-201ENST00000623080 671 ntBASIC7.87□□□□□ -1.15
TOP2AP11388 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TOP2AP11388 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TOP2AP11388 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.86□□□□□ -1.15
TOP2AP11388 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC7.86□□□□□ -1.15
TOP2AP11388 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
TOP2AP11388 CASC19-206ENST00000641028 1430 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 MAPK10-372ENST00000641954 3413 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.86□□□□□ -1.15
TOP2AP11388 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 MIR23B-201ENST00000384832 97 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.86□□□□□ -1.15
TOP2AP11388 RCC2P2-201ENST00000422174 918 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 RN7SL542P-201ENST00000467147 294 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 AC020890.1-201ENST00000491837 504 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 TPT1P3-201ENST00000492841 512 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.86□□□□□ -1.15
TOP2AP11388 AC108064.1-201ENST00000513791 460 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 AP001804.2-201ENST00000533932 910 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
TOP2AP11388 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 CCDC58P3-201ENST00000590792 430 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 MIR6867-201ENST00000610636 67 ntBASIC7.86□□□□□ -1.15
TOP2AP11388 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
TOP2AP11388 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TOP2AP11388 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TOP2AP11388 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC7.85□□□□□ -1.15
TOP2AP11388 AL122126.1-201ENST00000546905 1318 ntBASIC7.85□□□□□ -1.15
TOP2AP11388 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 AL359837.1-201ENST00000381357 287 ntBASIC7.85□□□□□ -1.15
TOP2AP11388 SNRPFP1-201ENST00000414761 252 ntBASIC7.85□□□□□ -1.15
TOP2AP11388 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.85□□□□□ -1.15
TOP2AP11388 Z95327.1-201ENST00000446082 482 ntBASIC7.85□□□□□ -1.15
TOP2AP11388 OR8R1P-201ENST00000543943 764 ntBASIC7.85□□□□□ -1.15
TOP2AP11388 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.85□□□□□ -1.15
TOP2AP11388 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC7.85□□□□□ -1.15
TOP2AP11388 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.85□□□□□ -1.15
TOP2AP11388 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.85□□□□□ -1.15
TOP2AP11388 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
TOP2AP11388 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.85□□□□□ -1.15
TOP2AP11388 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TOP2AP11388 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TOP2AP11388 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
TOP2AP11388 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.84□□□□□ -1.15
TOP2AP11388 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
TOP2AP11388 SNORA11F-201ENST00000408237 128 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 AL132838.2-201ENST00000492041 314 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC7.84□□□□□ -1.15
TOP2AP11388 AC130352.1-201ENST00000602979 661 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 AC112200.1-201ENST00000625015 234 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 FRG1EP-201ENST00000634469 770 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
TOP2AP11388 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TOP2AP11388 AC007998.4-201ENST00000612496 2533 ntBASIC7.84□□□□□ -1.15
TOP2AP11388 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TOP2AP11388 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
TOP2AP11388 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.83□□□□□ -1.16
TOP2AP11388 MIR3065-201ENST00000390137 79 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC7.83□□□□□ -1.16
TOP2AP11388 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.83□□□□□ -1.16
TOP2AP11388 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.83□□□□□ -1.16
TOP2AP11388 SNORA74C-2-201ENST00000411179 201 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.83□□□□□ -1.16
TOP2AP11388 AP002812.1-201ENST00000495378 474 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 PGBD4P4-201ENST00000509673 613 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
TOP2AP11388 AL161729.3-201ENST00000603533 673 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC006133.1-201ENST00000617106 264 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC008785.1-201ENST00000624475 456 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC100778.3-201ENST00000580060 1750 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
TOP2AP11388 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
TOP2AP11388 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
TOP2AP11388 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC7.83□□□□□ -1.16
TOP2AP11388 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.83□□□□□ -1.16
TOP2AP11388 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC7.83□□□□□ -1.16
TOP2AP11388 CYCSP19-201ENST00000411715 316 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 OR13Z1P-201ENST00000416141 834 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 MFSD13B-201ENST00000420133 1290 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AL356276.2-201ENST00000435919 558 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.83□□□□□ -1.16
TOP2AP11388 SAP18P1-201ENST00000512058 390 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 AC079587.1-201ENST00000603846 277 ntBASIC7.83□□□□□ -1.16
TOP2AP11388 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TOP2AP11388 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TOP2AP11388 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TOP2AP11388 AC099654.3-201ENST00000447087 1546 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms