Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.9□□□□□ -1.79
CTSDP07339 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.9□□□□□ -1.79
CTSDP07339 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.9□□□□□ -1.79
CTSDP07339 MTND6P18-201ENST00000439477 513 ntBASIC3.9□□□□□ -1.79
CTSDP07339 AC074386.1-201ENST00000476560 767 ntBASIC3.9□□□□□ -1.79
CTSDP07339 RN7SL319P-201ENST00000480656 221 ntBASIC3.9□□□□□ -1.79
CTSDP07339 AC079841.1-201ENST00000481228 950 ntBASIC3.9□□□□□ -1.79
CTSDP07339 RN7SL629P-201ENST00000489622 285 ntBASIC3.9□□□□□ -1.79
CTSDP07339 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.9□□□□□ -1.79
CTSDP07339 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.9□□□□□ -1.79
CTSDP07339 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC3.9□□□□□ -1.79
CTSDP07339 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.9□□□□□ -1.79
CTSDP07339 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.9□□□□□ -1.79
CTSDP07339 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.9□□□□□ -1.79
CTSDP07339 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.9□□□□□ -1.79
CTSDP07339 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.9□□□□□ -1.79
CTSDP07339 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.9□□□□□ -1.79
CTSDP07339 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.9□□□□□ -1.79
CTSDP07339 SNX18P1Y-201ENST00000616231 511 ntBASIC3.9□□□□□ -1.79
CTSDP07339 CR381572.2-201ENST00000624852 397 ntBASIC3.9□□□□□ -1.79
CTSDP07339 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
CTSDP07339 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTSDP07339 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTSDP07339 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTSDP07339 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.89□□□□□ -1.79
CTSDP07339 MTND4P26-201ENST00000415971 1359 ntBASIC3.89□□□□□ -1.79
CTSDP07339 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CTSDP07339 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 AL589647.1-201ENST00000402485 466 ntBASIC3.89□□□□□ -1.79
CTSDP07339 GTF2IP5-201ENST00000414608 731 ntBASIC3.89□□□□□ -1.79
CTSDP07339 ATG4AP1-201ENST00000416893 538 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AC073136.2-201ENST00000417282 849 ntBASIC3.89□□□□□ -1.79
CTSDP07339 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 CNOT7P2-201ENST00000441051 832 ntBASIC3.89□□□□□ -1.79
CTSDP07339 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 AL389915.2-201ENST00000454576 441 ntBASIC3.89□□□□□ -1.79
CTSDP07339 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.89□□□□□ -1.79
CTSDP07339 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.89□□□□□ -1.79
CTSDP07339 PPBPP1-201ENST00000510807 373 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.89□□□□□ -1.79
CTSDP07339 RNA5SP92-201ENST00000516437 110 ntBASIC3.89□□□□□ -1.79
CTSDP07339 RNA5SP34-201ENST00000516887 130 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AC008694.2-201ENST00000517591 306 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 AC011447.4-201ENST00000587562 111 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.89□□□□□ -1.79
CTSDP07339 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 AP000894.4-201ENST00000610185 483 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AL627230.1-201ENST00000613077 211 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AL512624.1-201ENST00000613638 469 ntBASIC3.89□□□□□ -1.79
CTSDP07339 AL591926.8-201ENST00000616876 211 ntBASIC3.89□□□□□ -1.79
CTSDP07339 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.89□□□□□ -1.79
CTSDP07339 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTSDP07339 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 AC138627.1-204ENST00000641894 765 ntBASIC3.89□□□□□ -1.79
CTSDP07339 CDY11P-201ENST00000447168 1651 ntBASIC3.89□□□□□ -1.79
CTSDP07339 THAP12P4-201ENST00000528321 2266 ntBASIC3.89□□□□□ -1.79
CTSDP07339 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.89□□□□□ -1.79
CTSDP07339 AL590763.1-201ENST00000398297 1545 ntBASIC3.89□□□□□ -1.79
CTSDP07339 CIR1P2-201ENST00000514821 1342 ntBASIC3.89□□□□□ -1.79
CTSDP07339 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.89□□□□□ -1.79
CTSDP07339 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTSDP07339 RARSP1-201ENST00000542842 1418 ntBASIC3.88□□□□□ -1.79
CTSDP07339 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
CTSDP07339 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTSDP07339 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTSDP07339 KPNA2P2-201ENST00000419546 1489 ntBASIC3.88□□□□□ -1.79
CTSDP07339 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.88□□□□□ -1.79
CTSDP07339 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTSDP07339 SNURFL-201ENST00000309296 343 ntBASIC3.88□□□□□ -1.79
CTSDP07339 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CTSDP07339 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTSDP07339 RN7SKP115-201ENST00000363177 317 ntBASIC3.88□□□□□ -1.79
CTSDP07339 RNA5SP428-201ENST00000365129 132 ntBASIC3.88□□□□□ -1.79
CTSDP07339 RNA5SP22-201ENST00000365393 109 ntBASIC3.88□□□□□ -1.79
CTSDP07339 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms