Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.25□□□□□ -1.73
HLA-DPB1P04440 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC017104.4-201ENST00000636283 1592 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 DDX18P6-201ENST00000450119 1997 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RNA5SP305-201ENST00000362665 119 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AL355994.1-201ENST00000424379 260 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RBMY2QP-201ENST00000429799 1147 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 CEACAMP7-201ENST00000444105 496 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RPL7AP6-201ENST00000477943 801 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC008638.1-201ENST00000506035 866 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC110775.1-201ENST00000513721 462 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RFPL4AP3-201ENST00000515267 345 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RPL7P50-201ENST00000600588 727 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 MEMO1P5-201ENST00000604810 406 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 NF1P10-201ENST00000613227 742 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC009237.17-201ENST00000618111 748 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 AC018445.2-201ENST00000622987 260 ntBASIC4.24□□□□□ -1.73
HLA-DPB1P04440 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DPB1P04440 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AL136164.3-201ENST00000624429 3978 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 SNORA70-201ENST00000384436 135 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 Z97832.1-201ENST00000402490 328 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AL357515.1-201ENST00000402967 542 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC000111.2-201ENST00000448200 210 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 EIF2S2P5-201ENST00000457635 968 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 PSMC1P13-201ENST00000458195 985 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 RPS26P28-201ENST00000470806 348 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 RN7SL97P-201ENST00000486780 299 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 RPL37AP8-201ENST00000494116 276 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC140172.1-201ENST00000502928 141 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 MRPS33P2-201ENST00000507850 322 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC025423.2-201ENST00000537570 439 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 FKBP1BP1-201ENST00000553366 325 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC044860.2-201ENST00000561005 179 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AP000919.1-201ENST00000582850 985 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AL713998.2-201ENST00000604538 1198 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC073869.7-201ENST00000640874 297 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 CR382285.2-201ENST00000624662 1495 ntBASIC4.23□□□□□ -1.73
HLA-DPB1P04440 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DPB1P04440 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DPB1P04440 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms