Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SKP59-201ENST00000410520 314 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 OR13Z1P-201ENST00000416141 834 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.61□□□□□ -1.67
MT-ND1P03886 RPS29P9-201ENST00000440360 171 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.61□□□□□ -1.67
MT-ND1P03886 TDGF1P1-201ENST00000445734 527 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AL354710.1-201ENST00000453641 246 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC011225.1-201ENST00000457751 369 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.61□□□□□ -1.67
MT-ND1P03886 RFPL4AP5-201ENST00000514977 504 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.61□□□□□ -1.67
MT-ND1P03886 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.61□□□□□ -1.67
MT-ND1P03886 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC090888.3-201ENST00000558917 509 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AC092868.3-201ENST00000560515 784 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 AC104307.1-201ENST00000616142 196 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 CASC19-264ENST00000641912 1184 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 AC108751.5-201ENST00000492880 1336 ntBASIC4.61□□□□□ -1.67
MT-ND1P03886 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MT-ND1P03886 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MT-ND1P03886 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
MT-ND1P03886 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MT-ND1P03886 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.6□□□□□ -1.67
MT-ND1P03886 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AL450326.2-201ENST00000421913 1962 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 RNU1-83P-201ENST00000363426 164 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RNU6-152P-201ENST00000384037 107 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 SNORA66-201ENST00000384792 133 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 GSTA12P-201ENST00000402398 508 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RN7SKP199-201ENST00000410325 305 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RPS26P13-201ENST00000419030 330 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RPA2P2-201ENST00000419698 796 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AL121776.1-201ENST00000429337 372 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AC002069.1-201ENST00000429649 1159 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.6□□□□□ -1.67
MT-ND1P03886 MTCO1P57-201ENST00000432182 261 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 MTCO3P43-201ENST00000440974 771 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 TCEA1P1-201ENST00000449716 880 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 CLIC4P1-201ENST00000453177 535 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RPL7P39-201ENST00000481157 744 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 PCNAP1-201ENST00000505363 709 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 PGAM1P13-201ENST00000507497 754 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AC034244.2-201ENST00000514668 858 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 RNA5SP362-201ENST00000516048 118 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
MT-ND1P03886 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC107918.3-201ENST00000533272 382 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.6□□□□□ -1.67
MT-ND1P03886 FKBP1AP1-201ENST00000594588 318 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC095055.1-201ENST00000603472 1113 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC009032.1-201ENST00000617574 431 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 RPL23AP61-201ENST00000623642 466 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 AP003400.6-201ENST00000624698 740 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC011493.1-201ENST00000596753 1632 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.6□□□□□ -1.67
MT-ND1P03886 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.6□□□□□ -1.67
MT-ND1P03886 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MT-ND1P03886 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 MAPK10-320ENST00000641462 6696 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MT-ND1P03886 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 SNORA17.1-201ENST00000362945 126 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms