Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 RN7SKP145-201ENST00000363291 303 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 RNU6-549P-201ENST00000384433 107 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC007394.1-201ENST00000421941 531 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VPS4BO75351 PRUNEP1-201ENST00000425846 705 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 NANOGP4-201ENST00000427230 913 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 AL592437.1-201ENST00000443781 492 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 LINC02210-201ENST00000444561 288 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC083899.1-201ENST00000454465 3819 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC005410.1-202ENST00000460347 485 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 RPS23P2-201ENST00000463671 415 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 RN7SL269P-201ENST00000467795 305 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 RPL23AP44-201ENST00000482216 473 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 RN7SL466P-201ENST00000497546 295 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC074255.1-201ENST00000511259 501 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 SNORA70.20-201ENST00000516848 126 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 OR4A2P-201ENST00000527276 913 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC090695.1-201ENST00000561269 1222 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
VPS4BO75351 Z94722.1-201ENST00000604328 474 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC016877.3-201ENST00000606778 504 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 AP005431.1-201ENST00000618479 319 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC073869.7-201ENST00000640874 297 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 LINC02211-204ENST00000642024 1070 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 PSG10P-201ENST00000501199 1500 ntBASIC5.57□□□□□ -1.52
VPS4BO75351 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS4BO75351 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS4BO75351 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS4BO75351 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4BO75351 ADAM24P-201ENST00000398655 2101 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 OR4F13P-202ENST00000560066 2054 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VPS4BO75351 SNORD113-6-201ENST00000363345 75 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4BO75351 SNORA70-201ENST00000384436 135 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 RPS27AP11-201ENST00000402798 447 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 SPTLC1P2-201ENST00000407089 121 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 C1DP1-201ENST00000426049 402 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AL136231.1-201ENST00000429407 730 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 RPL34P26-201ENST00000445636 354 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 CASP3P1-201ENST00000446037 609 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.56□□□□□ -1.52
VPS4BO75351 AC090602.1-201ENST00000469695 252 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 ATP5LP5-201ENST00000483050 299 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 RPS17P5-201ENST00000498293 408 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.56□□□□□ -1.52
VPS4BO75351 BX510359.5-201ENST00000515651 304 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.56□□□□□ -1.52
VPS4BO75351 HIGD1AP18-201ENST00000520730 278 ntBASIC5.56□□□□□ -1.52
VPS4BO75351 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms