Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL121882.1-201ENST00000422893 417 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC090018.1-201ENST00000434369 367 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AL161722.2-201ENST00000434731 981 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RHOT1P3-201ENST00000436571 331 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.24□□□□□ -1.57
SMAD6O43541 CEACAMP7-201ENST00000444105 496 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.24□□□□□ -1.57
SMAD6O43541 NPM1P39-201ENST00000449818 867 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC104164.3-201ENST00000467363 1258 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AC020779.1-201ENST00000478757 796 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 RN7SL826P-201ENST00000479724 288 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC004980.4-201ENST00000513375 203 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 SOX5P1-201ENST00000524155 1127 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.24□□□□□ -1.57
SMAD6O43541 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 AC008751.2-201ENST00000597885 980 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AC068620.3-201ENST00000602749 560 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 DUXAP3-201ENST00000603616 594 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AL450270.1-201ENST00000606160 391 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 AP005432.2-201ENST00000608162 586 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SMAD6O43541 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SMAD6O43541 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMAD6O43541 AL121839.2-201ENST00000565058 6943 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.24□□□□□ -1.57
SMAD6O43541 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.24□□□□□ -1.57
SMAD6O43541 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 AC006210.2-201ENST00000367074 1545 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMAD6O43541 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SMAD6O43541 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMAD6O43541 RNU4-39P-201ENST00000362455 127 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 OR1L6-202ENST00000373684 1044 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 RNU6-1257P-201ENST00000384625 110 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.23□□□□□ -1.57
SMAD6O43541 RN7SKP114-201ENST00000410327 279 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMAD6O43541 OR6C64P-201ENST00000419708 825 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 AC115285.1-201ENST00000424879 736 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 MRPS33P4-201ENST00000434892 317 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 RPL7L1P1-201ENST00000448259 785 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
SMAD6O43541 OTX2P1-201ENST00000450956 354 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 MTCYBP35-201ENST00000503630 1137 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.23□□□□□ -1.57
SMAD6O43541 MTCO3P28-201ENST00000513351 515 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 MTND4LP31-201ENST00000514859 294 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 RN7SKP147-201ENST00000517154 244 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 AC013701.1-201ENST00000522657 465 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.23□□□□□ -1.57
SMAD6O43541 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.23□□□□□ -1.57
SMAD6O43541 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.23□□□□□ -1.57
SMAD6O43541 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.23□□□□□ -1.57
SMAD6O43541 RN7SL290P-201ENST00000578661 300 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMAD6O43541 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.23□□□□□ -1.57
SMAD6O43541 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.23□□□□□ -1.57
SMAD6O43541 NIFKP6-201ENST00000598115 845 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AC096553.1-201ENST00000605169 829 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AC093799.2-201ENST00000610062 578 ntBASIC5.23□□□□□ -1.57
SMAD6O43541 AC126544.2-201ENST00000625174 749 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms